Hello,

The message is not about lengths, it's about sets. It means that the two factors, compkey and armkey don't have the same levels, which you can see with

levels(compkey)
levels(armkey)

and test for equality.

Also, your post's prologue doesn't have a direct relation with the error, you could have skipped the lines up to, including, sink(). It's much better to provide an actual data example:

dput( head(outcome, 50) )   # paste the output of this in a post.

Hope this helps,

Rui Barradas
Em 17-08-2012 14:01, Sri krishna Devarayalu Balanagu escreveu:
Why the error is coming? even though the length of outcome.new$compkey and 
outcome.new$armkey were exactly same.
Can anyone help?

setwd("D:/AZ")
library("RODBC")
cdb_cnct <- 
odbcConnectExcel("AZIF_DC_GVK_NSCLC_MSALL_287papers_02072012_141450_v1_4.xls")
outcomes <- sqlFetch(cdb_cnct, "Outcomes_info")
odbcClose(cdb_cnct)
rm(cdb_cnct)
sink("Dependency checks.log")
outcomes[(outcomes$Comparator != 9999), ] -> outcome
compkey <- paste(outcome$Comparator, outcome$Comparator_Subarm, sep='_')
armkey <- paste(outcome$Arm_ID, outcome$SubArm_ID, sep='_')
outcome.new <- cbind(outcome, compkey, armkey)
invalid.ids <- outcome.new[outcome.new$compkey == outcome.new$armkey, 
c("Assessment_record_ID")]

Error in Ops.factor(outcome.new$compkey, outcome.new$armkey) :
   level sets of factors are different


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