I have a graph with edge and vertex weights, stored in two data frames:
--8<---------------cut here---------------start------------->8---
vertices <- data.frame(vertex=c("a","b","c","d"),weight=c(1,2,1,3))
edges <- data.frame(src=c("a","a","b","c","d"),dst=c("b","c","d","d","a"),
weight=c(1,2,1,3,1))
--8<---------------cut here---------------end--------------->8---
I can create a graph from this data:
--8<---------------cut here---------------start------------->8---
library(igraph)
graph <- graph.data.frame(edges, vertices = vertices, directed=FALSE)
--8<---------------cut here---------------end--------------->8---
what I want is to compute some edge weight stats (mean/median/max/min/)
for each vertex.
I guess I can do something like
--8<---------------cut here---------------start------------->8---
> sapply(vertices$vertex, function (v) mean(E(g)[inc(v)]$weight))
Note: no visible global function definition for 'inc'
[1] 1.333333 1.000000 2.500000 1.666667
--8<---------------cut here---------------end--------------->8---
but I was wondering if this is TRT, given the correct answer with a
scary note.
Thanks!
--
Sam Steingold (http://sds.podval.org/) on Ubuntu 12.04 (precise) X 11.0.11103000
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