Ok, I`m going to check the n.keep values. Thanks!
Sander ________________________________ From: Michael Weylandt [via R] [mailto:ml-node+s789695n463311...@n4.nabble.com] Sent: dinsdag 12 juni 2012 17:08 To: Zeeuw, S.A.J. van der (PATH) Subject: Re: Error in sort(abs(diff(genomdat)))[1:n.keep] : only 0's may be mixed with negative subscripts Your problem is that n.keep is less than 0. Why that is I cannot tell without appropriate context. E.g., x <- 1:10 x[2:5] x[0:1] x[(-3):1] Michael On Tue, Jun 12, 2012 at 6:01 AM, sanshine <[hidden email]</user/SendEmail.jtp?type=node&node=4633114&i=0>> wrote: > Hello everyone, > > I`m trying to normalize and analize an illumina SNP array. > But when i`m trying to segmentate i`m getting an error: > Error in sort(abs(diff(genomdat)))[1:n.keep] : > only 0's may be mixed with negative subscripts. > I`ve tried everything to fix this but the error still occours. > > Can anybody give me a tip? > > Thanks in advance! > > > -- > View this message in context: > http://r.789695.n4.nabble.com/Error-in-sort-abs-diff-genomdat-1-n-keep-only-0-s-may-be-mixed-with-negative-subscripts-tp4633091.html > Sent from the R help mailing list archive at Nabble.com. > > ______________________________________________ > [hidden email]</user/SendEmail.jtp?type=node&node=4633114&i=1> mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. ______________________________________________ [hidden email]</user/SendEmail.jtp?type=node&node=4633114&i=2> mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. ________________________________ If you reply to this email, your message will be added to the discussion below: http://r.789695.n4.nabble.com/Error-in-sort-abs-diff-genomdat-1-n-keep-only-0-s-may-be-mixed-with-negative-subscripts-tp4633091p4633114.html To unsubscribe from Error in sort(abs(diff(genomdat)))[1:n.keep] : only 0's may be mixed with negative subscripts, click here<http://r.789695.n4.nabble.com/template/NamlServlet.jtp?macro=unsubscribe_by_code&node=4633091&code=Uy5BLkoudmFuX2Rlcl9aZWV1d0BsdW1jLm5sfDQ2MzMwOTF8LTE4ODIzNjgxMTk=>. NAML<http://r.789695.n4.nabble.com/template/NamlServlet.jtp?macro=macro_viewer&id=instant_html%21nabble%3Aemail.naml&base=nabble.naml.namespaces.BasicNamespace-nabble.view.web.template.NabbleNamespace-nabble.view.web.template.NodeNamespace&breadcrumbs=notify_subscribers%21nabble%3Aemail.naml-instant_emails%21nabble%3Aemail.naml-send_instant_email%21nabble%3Aemail.naml> -- View this message in context: http://r.789695.n4.nabble.com/Error-in-sort-abs-diff-genomdat-1-n-keep-only-0-s-may-be-mixed-with-negative-subscripts-tp4633091p4633217.html Sent from the R help mailing list archive at Nabble.com. [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
