Thanks Petr. Unfortunately this does not help. Kristian
Am 17.04.2012 um 14:18 schrieb Petr PIKAL: > Hi > >> >> Hi there >> >> is it possible that pdfs generated using the pdf() function with default > >> settings leads to loss of information? I was plotting copy number > changes >> from Agilent 180k data in form of rectangles (rect()) while each > rectangle >> represents one region of copy number change. When plotting into a pdf I >> noticed that some very small rectangles do not appear (even after >> extensive zooming) in the pdf using the pdf() function. But they do when > >> writing the screen output into a pdf using the GUI. Does anyone have > some >> advice on this how I can plot pdfs without losing information? > > I am not sure if it has something to do with dingbats but you could try > it. > > Set > > useDingbats=FALSE > > in you pdf call. > > Regards > Petr > >> >> Best wishes >> >> Kristian >> >> R version 2.14.0 (2011-10-31) >> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit) >> >> locale: >> [1] de_DE.UTF-8/de_DE.UTF-8/de_DE.UTF-8/C/de_DE.UTF-8/de_DE.UTF-8 >> >> attached base packages: >> [1] stats graphics grDevices utils datasets methods base >> >> other attached packages: >> [1] CGHregions_1.12.0 CGHcall_2.14.0 CGHbase_1.12.0 marray_1.32.0 >> [5] limma_3.10.3 Biobase_2.14.0 DNAcopy_1.28.0 impute_1.28.0 >> >> loaded via a namespace (and not attached): >> [1] tools_2.14.0 >> >> ________________________________ >> >> Arbeitsgruppenleiter Integrative Biologie / Head of Integrative Biology > Group >> Abteilung für Strahlenzytogenetik / Research Unit of Radiation > Cytogenetics >> >> Tel.: +49-89-3187-3515 >> >> >> ________________________________ >> Helmholtz Zentrum München >> Deutsches Forschungszentrum für Gesundheit und Umwelt (GmbH) >> Ingolstädter Landstr. 1 >> 85764 Neuherberg >> www.helmholtz-muenchen.de >> Aufsichtsratsvorsitzende: MinDir´in Bärbel Brumme-Bothe >> Geschäftsführer: Prof. Dr. Günther Wess und Dr. Nikolaus Blum >> Registergericht: Amtsgericht München HRB 6466 >> USt-IdNr: DE 129521671 >> >> [[alternative HTML version deleted]] >> >> ______________________________________________ >> R-help@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. > Helmholtz Zentrum München Deutsches Forschungszentrum für Gesundheit und Umwelt (GmbH) Ingolstädter Landstr. 1 85764 Neuherberg www.helmholtz-muenchen.de Aufsichtsratsvorsitzende: MinDir´in Bärbel Brumme-Bothe Geschäftsführer: Prof. Dr. Günther Wess und Dr. Nikolaus Blum Registergericht: Amtsgericht München HRB 6466 USt-IdNr: DE 129521671 ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
