Sarah, . clust_tree=hclust(as.dist(x),method="complete") . plot(clust_tree)
this produces a dendrogram, whereas . clust_tree=hclust(as.dist(x),method="complete") . cut = cutree(clust_tree,k=1:5) . plot(cut) produces a plot with 2 dots. The dissimilarity matrix x is 100*100 matrix. Thanks for any feedback. Also, I am looking at various methods to retrieve the sub-trees. Any tips on such techniques would be helpful to me. -- View this message in context: http://r.789695.n4.nabble.com/hclust-and-plot-functions-work-cutree-does-not-tp4515010p4528282.html Sent from the R help mailing list archive at Nabble.com. ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.