Hi, I was using SPLS package to do multi-class classification and would require probabilities to be output for each class. In the vignette, the documentation does say that you can output probabilities by requesting fit.type = "response", however I still only get predicted classes, rather than the respective probabilities.
library(spls) data(prostate) # SPLSDA with eta=0.8 & 3 hidden components f <- splsda( prostate$x, prostate$y, K=3, eta=0.8, scale.x=FALSE ) # Prediction on the training dataset (pred.f <- predict( f, type="fit" )) #predict probabilities pred.f_withprobs <- predict( f, type="fit", fit.type = "response" ) -- View this message in context: http://r.789695.n4.nabble.com/SPLS-does-not-output-probabilities-for-predicted-classes-tp4503031p4503031.html Sent from the R help mailing list archive at Nabble.com. ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
