Succinct is good, but reproducible is even more important.
Think ?dput or ?sample so we have some data like you do, your current
algorithm, or at least a desired output example (again using dput)
---------------------------------------------------------------------------
Jeff Newmiller The ..... ..... Go Live...
DCN:<jdnew...@dcn.davis.ca.us> Basics: ##.#. ##.#. Live Go...
Live: OO#.. Dead: OO#.. Playing
Research Engineer (Solar/Batteries O.O#. #.O#. with
/Software/Embedded Controllers) .OO#. .OO#. rocks...1k
---------------------------------------------------------------------------
Sent from my phone. Please excuse my brevity.
Walter Anderson <wandrso...@gmail.com> wrote:
>On 03/16/2012 12:23 PM, Sarah Goslee wrote:
>> There's almost certainly a better way, but I'd be more inclined to
>look for
>> it if you'd provide a small reproducible example so I could actually
>try it.
>> Without knowing the structure of your data, it's very hard to offer
>> alternatives.
>>
>> Sarah
>>
>> On Fri, Mar 16, 2012 at 12:59 PM, Walter
>Anderson<wandrso...@gmail.com> wrote:
>>> I am working on a simulation where I need to count the number of
>matches for
>>> an arbitrary pattern in a large sequence of binomial factors. My
>current
>>> code is
>>>
>>> for(indx in 1:(length(bin.05)-3))
>>> if ((bin.05[indx] == test.pattern[1])&& (bin.05[indx+1] ==
>>> test.pattern[2])&& (bin.05[indx+2] == test.pattern[3]))
>>> return.values$count.match.pattern[1] =
>>> return.values$count.match.pattern[1] + 1
>>>
>>> Since I am running the above code for each simulation multiple times
>on
>>> sequences of 10,000,000 factors the code is taking longer than I
>would like.
>>> Is there a better (more "R" way of achieving the same answer?
>>>
>>> Walter Anderson
>>>
>Thank you for responding. I was attempting to keep my code snippet
>small, since my last question which contained what I thought was a
>small
>(but complete example) only received responses that the
>provided code was not succinct enough.
>
>the provided sequence of factors (bin.05) consist of a vector of up of
>factors like this; [T,T,O,T,O,O,T,T,T,...] in a variety of different
>proportions. The search pattern consists of any one of the
>combinations
>of the factors (T & O) in a set of three, ie. [T,T,O]
>
>______________________________________________
>R-help@r-project.org mailing list
>https://stat.ethz.ch/mailman/listinfo/r-help
>PLEASE do read the posting guide
>http://www.R-project.org/posting-guide.html
>and provide commented, minimal, self-contained, reproducible code.
______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
