my.mat[rownames(my.mat) in c(5951, 236, 6306, 5950, 145742, 1123),] or something close to this. Need to read introduction to R and subsetting.
On 3/24/08, dinesh kumar <[EMAIL PROTECTED]> wrote: > Dear R users > > I have a big matrix like > > 6021 1188 790 290 1174 1015 1990 6613 6288 > 100714 > 6021 1 0.658 0.688 0.474 0.262 0.163 0.137 0.32 > 0.252 0.206 > 1188 0.658 1 0.917 0.245 0.331 0.122 0.148 0.194 > 0.168 0.171 > 790 0.688 0.917 1 0.243 0.31 0.122 0.15 0.19 > 0.171 0.174 > 290 0.474 0.245 0.243 1 0.39 0.319 0.187 0.4 > 0.311 0.235 > 1174 0.262 0.331 0.31 0.39 1 0.295 0.352 0.345 > 0.306 0.308 > 1015 0.163 0.122 0.122 0.319 0.295 1 0.421 0.343 > 0.442 0.435 > 1990 0.137 0.148 0.15 0.187 0.352 0.421 1 0.313 > 0.38 0.395 > 6613 0.32 0.194 0.19 0.4 0.345 0.343 0.313 1 0.58 > 0.429 > 6288 0.252 0.168 0.171 0.311 0.306 0.442 0.38 0.58 > 1 0.723 > 100714 0.206 0.171 0.174 0.235 0.308 0.435 0.395 > 0.429 0.723 1 > 5951 0.22 0.168 0.171 0.267 0.318 0.478 0.409 0.478 > 0.844 0.85 > 5960 0.232 0.183 0.186 0.272 0.324 0.42 0.383 0.522 > 0.686 0.711 > 236 0.259 0.213 0.218 0.283 0.357 0.382 0.4 0.549 > 0.655 0.608 > 64956 0.199 0.172 0.175 0.25 0.355 0.444 0.475 0.523 > 0.633 0.614 > 239 0.188 0.169 0.173 0.237 0.362 0.463 0.5 0.469 > 0.596 0.692 > 33032 0.25 0.167 0.169 0.308 0.301 0.407 0.346 0.486 > 0.655 0.64 > 6262 0.254 0.178 0.182 0.314 0.329 0.396 0.36 0.459 > 0.679 0.633 > 5961 0.262 0.189 0.194 0.311 0.342 0.362 0.377 0.468 > 0.621 0.574 > 5962 0.243 0.177 0.18 0.298 0.324 0.389 0.353 0.453 > 0.667 0.62 > 6306 0.226 0.168 0.171 0.274 0.306 0.389 0.38 0.514 > 0.698 0.62 > 6106 0.226 0.168 0.171 0.274 0.306 0.389 0.38 0.514 > 0.698 0.62 > 6287 0.208 0.175 0.178 0.25 0.328 0.429 0.422 0.529 > 0.771 0.689 > 5950 0.193 0.175 0.179 0.23 0.344 0.465 0.5 0.448 > 0.733 0.816 > 833 0.312 0.244 0.242 0.408 0.444 0.328 0.317 0.526 > 0.562 0.517 > 750 0.168 0.155 0.157 0.208 0.339 0.514 0.515 0.385 > 0.578 0.722 > 6137 0.201 0.168 0.171 0.239 0.306 0.389 0.38 0.453 > 0.698 0.62 > 145742 0.317 0.229 0.236 0.349 0.325 0.339 0.305 > 0.519 0.581 0.534 > 5810 0.364 0.216 0.221 0.411 0.294 0.338 0.269 0.603 > 0.631 0.47 > 825 0.364 0.216 0.221 0.411 0.294 0.338 0.269 0.603 > 0.631 0.47 > 7405 0.313 0.246 0.244 0.355 0.367 0.29 0.317 0.537 > 0.507 0.484 > 1045 0.133 0.124 0.135 0.198 0.333 0.441 0.344 0.277 > 0.362 0.341 > 1123 0.11 0.106 0.104 0.157 0.262 0.415 0.368 0.227 > 0.304 0.333 > 588 0.281 0.312 0.34 0.303 0.419 0.278 0.4 0.287 > 0.312 0.316 > > with more than thousand number of rows and column > I want to extract or subset a child matrix from above with specific row > names or col names. > e.g. > For above matrix I need only rows which has following row names. > 5951 236 6306 5950 145742 1123 > > I would appreciate if you can use this matrix as input. > > Thanks in advance. > > Dinesh > > > > > -- > Dinesh Kumar Barupal > Research Associate > Metabolomics Fiehn Lab > UCD Genome Center > 451 East Health Science Drive > GBSF Builidng > University of California > DAVIS > 95616 > http://fiehnlab.ucdavis.edu/staff/kumar > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > -- Jim Holtman Cincinnati, OH +1 513 646 9390 What is the problem you are trying to solve? ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
