On Feb 1, 2012, at 10:21 PM, jjap wrote:

Dear users,
I am importing a csv file whose first row is a single value that I need to
capture in a variable.
 infile<-file.choose()
 in<-read.csv( infile, header=FALSE)
 single.value<-as.character(in[1,1])  # fine

Now I need to take rows 3 and on as the data
 df<-in[3:dim(in)[1],]

But row 2 contains what I want as header of df.
 colnames(df)<-in[2,]

Try

  names(df) <- as.character( colnames(df)<-in[2,] )


This gets a series of numbers (characters) "2" "5" "3" "11" instead of:
  "CatA" "Time" etc.
I suspect this has something to do with levels, but I cannot seem to find a
way to get the proper names.

You should do more reading on the construction of levels. Those column names are now "polluting" your factor levels. It would have been cleaner to read the first line of the file and then used read.table() with sep="," skip = 1, and header=TRUE. You can try to fix _your_ polluted factor problem with:

 df <- as.data.frame( lapply( df, factor))

All of the above untested in the absence of a reproducible example.


--
David Winsemius, MD
West Hartford, CT

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