Hi Dontrece,
It looks like you do not have an object "Final" in your active session.
Could you please show us how you read your data, e.g., what commands you
used and what's the result of ls()?
As Sarah Goslee mentioned in an earlier post, you probably used
read.table() or read.csv() but you haven't told us (yet).
Regards,
Jorge.-
On Mon, Jan 16, 2012 at 7:04 PM, Dontrece Smith <> wrote:
> Now, it read this:
>
> > library(mgcv)
> This is mgcv 1.7-6. For overview type 'help("mgcv-package")'.
> > gam(Atlantic ~ s(depth, bs="sos", k=4) + s(distance, bs="sos", k=4),
> data = Final)
> Error in inherits(x, "data.frame") : object 'Final' not found
>
>
> On 1/16/12, Jorge I Velez <jorgeivanve...@gmail.com> wrote:
> > Hi,
> >
> > If "x" is your data, then
> >
> > gam(Atlantic ~ s(depth, bs="sos", k=4) + s(distance, bs="sos", k=4),
> data =
> > x)
> >
> > will do. See examples in ?gam.
> >
> > BTW, how did you read your data in R? What's the output of ls()?
> >
> > HTH,
> > Jorge
> > *
> >
> > *
> >
> > On Mon, Jan 16, 2012 at 6:29 PM, ruggeddon24 <> wrote:
> >
> >> This is my first time running GAMs in R.
> >> My csv file has these column headings:
> >>
> >> "X" "Y" "Sound" "Atlantic" "Blacktip" "Bonnet"
> >> "Bull" "Finetooth" "Lemon" "Scalloped" "Sandbar" "Spinner"
> >> "Abundance" "Diversity" "Depth" "Distance" "Width" "System"
> >> "Channel" "Profile" "Bathy" "Slope" "Salinity"
> >> X is longitude and Y is Latitude.
> >>
> >> I typed in the code below and received the reply "Error in eval(expr,
> >> envir,
> >> enclos) : object 'Atlantic' not found".
> >>
> >> > library(mgcv)
> >> This is mgcv 1.7-6. For overview type 'help("mgcv-package")'.
> >> > help("mgcv-package")
> >> starting httpd help server ... done
> >> > gam(Atlantic ~ s(depth, bs="sos", k=4) + s(distance, bs="sos", k=4))
> >> Error in eval(expr, envir, enclos) : object 'Atlantic' not found
> >>
> >> I do not have a clue how to fix this problem. Do I have too many
> variables
> >> or do I need to remove my x and y from the file? This data is being used
> >> to
> >> assess the spatial distribution of shark abundance in relation to
> >> environmental variables. I really cannot remove the x and y anyway. Help
> >> would be greatly appreciated.
> >>
> >> --
> >> View this message in context:
> >>
> http://r.789695.n4.nabble.com/Object-not-found-using-GAMs-in-MGCV-Package-tp4301836p4301836.html
> >> Sent from the R help mailing list archive at Nabble.com.
> >>
> >> ______________________________________________
> >> R-help@r-project.org mailing list
> >> https://stat.ethz.ch/mailman/listinfo/r-help
> >> PLEASE do read the posting guide
> >> http://www.R-project.org/posting-guide.html
> >> and provide commented, minimal, self-contained, reproducible code.
> >>
> >
>
>
> --
> Dontrece Smith
> Graduate Student
> Savannah State University
> 4906 Taylor Road
> Savannah, GA 31404
> (770) 401-3371
>
[[alternative HTML version deleted]]
______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
