On Dec 15, 2011, at 2:39 PM, Lost in R wrote:

After checking the original data in Excel for blanks and running Summary(cm3) to identify any null values in my data, I'm unable to identify an instances. Yet when I attempted to use the data in Random Forest, I get the following error. Is there something that Random Forest is reading as null which is not
actually null? Is there a better way to check for this?

library(randomForest)
system.time(
+ rf1 <- randomForest(as.matrix(

# Are you aware of the effect of using as.matrix(..) on the storage mode?

cm3[,c(2:length(colnames(cm3)))]),

# that was the x argument

+ cm3[,1],

# The y variable

data=cm3,

# That's odd. You already offered the data objects. I wonder what the function will do with that?


ntree=50)
+ )
*Error in randomForest.default(as.matrix(cm3[, c(2:length(colnames(cm3)))]),
:
 NA/NaN/Inf in foreign function call (arg 1)
In addition: Warning message:
In storage.mode(x) <- "double" : NAs introduced by coercion

I can see two potential sources of such an error.

Timing stopped at: 1.33 0.01 1.35 *


Thanks in advance,
Mike

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