Suppose I have the following matrix > class(cov_50) [1] "matrix" > cov_50 [,1] [,2] [1,] 0.3201992 2.308084 [2,] 6.7312928 5.719641
I then use the following function via apply and get the desired output, a list signif <- function(x) which(abs(x) > 1.96) apply(cov_50, 1, signif) > apply(cov_50, 1, signif) [[1]] [1] 2 [[2]] [1] 1 2 However, I can't see why the following occurs > class(cov_25) [1] "matrix" > cov_25 [,1] [,2] [1,] 12.116106 14.81248 [2,] 5.492176 4.73138 > apply(cov_25, 1, signif) [,1] [,2] [1,] 1 1 [2,] 2 2 So, using the same function (signif) on a different object of the same class yields a matrix and *not* a list as desired. I can't see any reason for the different output. > sessionInfo() R version 2.12.2 (2011-02-25) Platform: x86_64-pc-mingw32/x64 (64-bit) locale: [1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252 [3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C [5] LC_TIME=English_United States.1252 attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] quantreg_4.57 SparseM_0.86 [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.