On 11/18/2011 02:55 AM, Anup Som wrote:
Dear all,

           I was trying to normalize a subset of affy data those transcribe
are either P or M (called pm_filter).  I am able to normalize pm_filter
subset by using RMA method, however MAS5 is not working.

For RMA method, I used the following commend:  est<-rma(affydata,
subset=pm_filter).  Could any help me; how do I do this by using MAS5
method?

Hi --

You'll get knowledgeable help on the Bioconductor mailing list; posting does not require subscription.

http://bioconductor.org/help/mailing-list/

Martin


Regards,
Anup Som



--
Computational Biology
Fred Hutchinson Cancer Research Center
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Telephone: 206 667-2793

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