On 04.10.2011 13:30, Peter Minting wrote:

Dear R-help
Can anyone tell me why my curve appears the wrong way round on a rug plot?
I am using the same code as on pg 596 of the Crawley R-book.

mod<-glm(mort~logBd,binomial)

What is mort, what is logBd? I don't have access to the book. I have hidden it in my other office so that nobody can find it anymore.


par(mfrow=c(2,2))
xv<-seq(0,8,0.01)
yv<-predict(mod,list(logBd=xv),type="response")
plot(logBd,mort)
lines(xv,yv)
I've tried swapping xv and yv around but no luck.

Hopefully mort is a binary factor, i.e. with two levels. I that case they are at positions 1 and 2 on the y axis in plot(). yv is the reponse, i.e. is in the interval (0,1) if the binomial glm was successful. So a different scale.

So I guess
 lines(xv,yv+1)
could help.

Whatelse I think about "The R Book" can be found in my book review published in "Statistical Papers".

Best,
Uwe Ligges






Thanks,
Pete                                    
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