On Sun, 31 Jul 2011, Iasonas Lamprianou wrote:

Thanks
Pscl seems to be a sensible option.


I have the counts variable with the name "N". This variable can only take values bigger than zero!

I have two explanatory variables with the names "type" and "diam"

but when I run

hpm <- hurdle(n ~ type+diam, data = an, dist = "poisson")

I get the message "invalid dependent variable, minimum count is not zero". Well, I know that N>0, that is why want to run a zero-truncated model. But I must be missing something...and the manual does not seem to help a lot...

Can anyone help please?

As previously pointed out by others on this list: hurdle() is not what you are looking for (although it is related to what you want to do). The hurdle() model is a two-part model consisting of a zero-truncated count part and a binary part for modeling N=0 vs N>0. See also vignette("countreg", package = "pscl") for details.

As you don't need the binary hurdle part, you cannot use hurdle() directly.

This is why the package "countreg" on R-Forge provides the function zerotrunc() which essentially does the same thing as the count part in hurdle().

install.packages("countreg", repos = "http://R-Forge.R-project.org";)
library("countreg")
m <- zerotrunc(n ~ type + diam, data = an, dist = "poisson")
summary(m)

?
Dr. Iasonas Lamprianou
Department of Social and Political Sciences
University of Cyprus


________________________________
From: Mitchell Maltenfort <mmal...@gmail.com>
To: Iasonas Lamprianou <lampria...@yahoo.com>; "r-help@r-project.org" 
<r-help@r-project.org>
Sent: Sunday, 31 July 2011, 20:45
Subject: Re: [R] zero truncated poisson regression

Pscl package.

On 7/31/11, Iasonas Lamprianou <lampria...@yahoo.com> wrote:
Dear friends,

does anyone know how I can run a zero truncated poisson regression using R
(or even SPSS)?

Dr. Iasonas Lamprianou
Department of Social and Political Sciences
University of Cyprus

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