My R is 2.12.0. > R.version.string [1] "R version 2.12.0 (2010-10-15)" > packageVersion("RSQLite") [1] '0.8.0' > packageVersion("sqldf") [1] '0.3.5'
So it seems I have to update or install the 2.13.0 version in my linux machine. On Wed, Jun 22, 2011 at 3:04 PM, Gabor Grothendieck <ggrothendi...@gmail.com > wrote: > On Wed, Jun 22, 2011 at 6:01 PM, Changbin Du <changb...@gmail.com> wrote: > > I found the following errors: > > > > > >> library(sqldf) > > Loading required package: DBI > > Loading required package: RSQLite > > Loading required package: RSQLite.extfuns > > Error: package 'RSQLite' 0.8-0 is loaded, but >= 0.9.1 is required by > > 'RSQLite.extfuns' > > > >> hh<-read.csv.sql("/house/homedirs/c/cdu/operon/gh5/hypo_re.dimer", > >> header=FALSE, sep="\t",sql="select varr from file", quote="", fill=T) > > Error: could not find function "read.csv.sql" > > > > Make sure you are using the most recent versions of R, RSQLite and sql > > packageVersion("sqldf") > [1] 0.4.1 > > packageVersion("RSQLite") > [1] 0.9.4 > > R.version.string > [1] "R version 2.13.0 Patched (2011-06-09 r56106)" > > > -- > Statistics & Software Consulting > GKX Group, GKX Associates Inc. > tel: 1-877-GKX-GROUP > email: ggrothendieck at gmail.com > -- Sincerely, Changbin -- Changbin Du DOE Joint Genome Institute Bldg 400 Rm 457 2800 Mitchell Dr Walnut Creet, CA 94598 Phone: 925-927-2856 [[alternative HTML version deleted]]
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