Hi:

Based on the information you provided, I would suggest looking into
the transform() and within() functions in base R, and perhaps the
mutate() function in package plyr.

HTH,
Dennis

On Tue, Jun 21, 2011 at 11:35 PM, Nabila Binte Zahur <nab...@nus.edu.sg> wrote:
> Dear Sirs/Madam,
>
> I am a beginner to R, and I am currently working on a data matrix which looks 
> like this:
>
>> head(oligo)
>
>        ko:K00001 ko:K00003 ko:K00005 ko:K00008 ko:K00009 ko:K00010 ko:K00012
> AAA       370          631                  365               67           
> 164             455       491
> KAA       603         1208                 170              157        68     
>            495       922
> NAA        60         110                     10                7            
> 44               51        94
> DAA       183         802                    41               62          26  
>             166       263
> CAA        58            12                    58                1            
>    1              23         8
> TAA       451          468                  201                90       131   
>            320       518
>
>
> For certain specific columns, I need to merge the columns in such a way that 
> the elements get added together.
>
> For example, in order to merge the first and the second columns, my output 
> for the first row shld be
>
>           ko:K00001/ko:K00003
> AAA       1001 (i.e. 370+631)
> KAA        1811 (i.e. 603+1208)
>
>
> and so on for the whole column.
>
> A colleague suggested using rowsum, but that seems to add up all the rows for 
> ALL the columns and not just specified ones. Also, the output doesnt contain 
> the column or row headers.
>
> Could you please suggest a solution?
>
> Yours sincerely
> Nabila Binte Zahur
>
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> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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>

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