On 3 May 2011 20:50, peter dalgaard <pda...@gmail.com> wrote: > > On Apr 28, 2011, at 15:18 , JP wrote: > >> >> >> I have found that when doing a wilcoxon signed ranked test you should report: >> >> - The median value (and not the mean or sd, presumably because of the >> underlying potential non normal distribution) >> - The Z score (or value) >> - r >> - p value >> > > ...printed on 40g/m^2 acid free paper with a pencil of 3B softness? > > Seriously, with nonparametrics, the p value is the only thing of real > interest, the other stuff is just attempting to check on authors doing their > calculations properly. The median difference is of some interest, but it is > not actually what is being tested, and in heavily tied data, it could even be > zero with a highly significant p-value. The Z score can in principle be > extracted from the p value (qnorm(p/2), basically) but it's obviously > unstable in the extreme cases. What is r? The correlation? Pearson, not > Spearman? >
Thanks for this Peter - a couple of more questions: a <- rnorm(500) b <- runif(500, min=0, max=1) x <- wilcox.test(a, b, alternative="two.sided", exact=T, paired=T) x$statistic V 31835 What is V? (is that the value Z of the test statistic)? z.score <- qnorm(x$p.value/2) [1] -9.805352 But what does this zscore show in practice? The d.f. are suggested to be reported here: http://staff.bath.ac.uk/pssiw/stats2/page2/page3/page3.html And r is mentioned here http://huberb.people.cofc.edu/Guide/Reporting_Statistics%20in%20Psychology.pdfs >> My questions are: >> >> - Are the above enough/correct values to report (some places even >> quote W and df) ? > > df is silly, and/or blatantly wrong... > >> What else would you suggest? >> - How do I calculate the Z score and r for the above example? >> - How do I get each statistic from the pairwise.wilcox.test call? >> >> Many Thanks >> JP >> >> ______________________________________________ >> R-help@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. > > -- > Peter Dalgaard > Center for Statistics, Copenhagen Business School > Solbjerg Plads 3, 2000 Frederiksberg, Denmark > Phone: (+45)38153501 > Email: pd....@cbs.dk Priv: pda...@gmail.com > > ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.