Out of curiosity, do you have a problem calling `library(ggplot2)` from the R prompt (after R is finished "spinning up")?
I vaguely recall (~ 2 years ago) that I was trying to load some packages in my ~/.Rprofile since I thought I always wanted them in R anyway and had problems ... I've given up trying to do that, though :-) So -- doesn't answer your question, but if you have number of libraries you want to load up, but it's a pain to call individual `library()` calls, maybe you can define a .setup() function in your ~/.Rprofile that does all these library calls for you when you come to a point in your (interactive) work that you think you need them. -steve On Sat, Apr 16, 2011 at 2:47 PM, stephen sefick <ssef...@gmail.com> wrote: > I have just upgraded to R 2.13 and have library(ggplot2) in my > .Rprofile (among other things). when i start R I get an error > message. Has something in the start up scripts changed? Is there a > better way to specify the library calls in .Rprofile? Thanks for all > of the help in advance. > > Error: > > Loading required package: grid > Loading required package: proto > Error in rename(x, .base_to_ggplot) : could not find function "setNames" > Error : unable to load R code in package 'ggplot2' > Error: package/namespace load failed for 'ggplot2' > [Previously saved workspace restored] > > > Computer 1: > > R version 2.13.0 (2011-04-13) > Platform: x86_64-pc-linux-gnu (64-bit) > > locale: > [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C > [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 > [5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8 > [7] LC_PAPER=en_US.UTF-8 LC_NAME=C > [9] LC_ADDRESS=C LC_TELEPHONE=C > [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C > > attached base packages: > [1] stats graphics grDevices utils datasets grid methods > [8] base > > other attached packages: > [1] proto_0.3-9.1 reshape_0.8.4 plyr_1.5.1 > > Computer 2 > > R version 2.13.0 (2011-04-13) > Platform: x86_64-pc-linux-gnu (64-bit) > > locale: > [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C > [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 > [5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8 > [7] LC_PAPER=en_US.UTF-8 LC_NAME=C > [9] LC_ADDRESS=C LC_TELEPHONE=C > [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C > > attached base packages: > [1] stats graphics grDevices utils datasets grid methods > [8] base > > other attached packages: > [1] proto_0.3-9.1 reshape_0.8.4 plyr_1.5.1 > > -- > Stephen Sefick > ____________________________________ > | Auburn University | > | Biological Sciences | > | 331 Funchess Hall | > | Auburn, Alabama | > | 36849 | > |___________________________________| > | sas0...@auburn.edu | > | http://www.auburn.edu/~sas0025 | > |___________________________________| > > Let's not spend our time and resources thinking about things that are > so little or so large that all they really do for us is puff us up and > make us feel like gods. We are mammals, and have not exhausted the > annoying little problems of being mammals. > > -K. Mullis > > "A big computer, a complex algorithm and a long time does not equal science." > > -Robert Gentleman > > ______________________________________________ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > -- Steve Lianoglou Graduate Student: Computational Systems Biology | Memorial Sloan-Kettering Cancer Center | Weill Medical College of Cornell University Contact Info: http://cbio.mskcc.org/~lianos/contact ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
