Hi, I am having a problem with installing Rmpi package on redhat linux machine. The R I am using is version 2.10.1. Heres what happens.
> install.packages( 'Rmpi' ) --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done trying URL 'http://cran.cnr.Berkeley.edu/src/contrib/Rmpi_0.5-9.tar.gz' Content type 'application/x-gzip' length 87953 bytes (85 Kb) opened URL ================================================== downloaded 85 Kb * installing *source* package âRmpiâ ... checking for gcc... gcc -std=gnu99 checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc -std=gnu99 accepts -g... yes checking for gcc -std=gnu99 option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -std=gnu99 -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking mpi.h usability... no checking mpi.h presence... no checking for mpi.h... no configure: error: "Cannot find mpi.h header file" ERROR: configuration failed for package âRmpiâ * removing â/usr/local/lib64/R/library/Rmpiâ The downloaded packages are in â/tmp/Rtmp1J1kDj/downloaded_packagesâ Updating HTML index of packages in '.Library' Warning message: In install.packages("Rmpi") : installation of package 'Rmpi' had non-zero exit status > library ('Rmpi' ) Error in library("Rmpi") : there is no package called 'Rmpi' > I think it is upset because the file mpi.h is missing. Am I right? If so, How would I cure this problem? And if not, what must I do? Please help. Thank you. Tena Sakai tsa...@gallo.ucsf.edu [[alternative HTML version deleted]]
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