Hi Allen,
Its difficult to know what is the problem without knowing what type of
object is 'Disease.FL'. plot() is a generic function and it will act
differently depending on the type of object you are passing to it. As
always, you should provide 'provide commented, minimal, self-contained,
reproducible code' so we can find the problem.
As a general comment, you can do any number of plots on a device (a
window or a pdf file). The limit is only given by the number and size
of the plots and the size of the device.
Julian
affy snp wrote:
> Dear list,
>
> I have a question about using plot().
>
> I tried the code:
> <pdf("mel_chr_all_13cancer_cghFLasso_all.pdf", height=6, width=11);plot(
> Disease.FL, index=1:4, type="All");dev.off();
> and it went through well which outputed 4 plots for 4 samples in one page.
>
> But if I increase the numbers of plots(samples) which I want, saying to 11,
> <pdf("mel_chr_all_13cancer_cghFLasso_all.pdf", height=6, width=11);plot(
> Disease.FL, index=1:11, type="All");dev.off();
> then I got an error message as:
> Error in segments((1:n)[y < 0], jp, (1:n)[y < 0], jp + y[y < 0], col =
> downcol) :invalid first argument
>
> I suspect that it has sth to do with the maxium plots which can be outputed
> on one page, which means less or equal to 4 will be fine but beyond that
> there will be a problem. I have tried the number 5 yet.
>
> Is there a way that I could specify that the plots can be put on multiple
> pages with 4 plots per one.
>
> Thank you very much for your help!
>
> Best,
> Allen
>
> [[alternative HTML version deleted]]
>
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