Dear Simon and everyone, Thanks for response.
Specifically, I have a tree with species "A, B, C" and
can be written as
"((A:45.15,C:45.15):46.19,B:91.34):0.0;" . If I use
the R command
> mytreeABC
[1] "((A:45.15,C:45.15):46.19,B:91.34):0.0;"
> plot(read.tree(text = mytreeABC))
I would get a tree as shown in "Rresult.ps" file.
However, I would like the tree to show like in
"treeABC.jpg" file.
In case the r-hlep list do not allow attachment, here
is what Rresult.ps look like:
|-------------B
|
|
| |------C
|------|
|------A
for the tree I want (in treeABC.jpg), I would mark the
edge AC as "b", and the edge AB as "a".
Thank you very much for help!
Hua
--- Simon Blomberg <[EMAIL PROTECTED]> wrote:
> ?edgelabels
>
> On Sun, 2007-11-11 at 16:51 -0800, Hua Li wrote:
> > Dear all,
> >
> > I'm using the "ape" package in R and want to draw
> a
> > phylogenetic tree with not only the tip labels but
> > also some labels for the edges. e.g. Mark the edge
> AB
> > as "m" in the tree ABC.
> >
> > Couldn't find a way to do that. Can someone help?
> >
> > Thanks,
> >
> > Hua
> >
> > ______________________________________________
> > R-help@r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/r-help
> > PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> > and provide commented, minimal, self-contained,
> reproducible code.
> --
> Simon Blomberg, BSc (Hons), PhD, MAppStat.
> Lecturer and Consultant Statistician
> Faculty of Biological and Chemical Sciences
> The University of Queensland
> St. Lucia Queensland 4072
> Australia
> Room 320 Goddard Building (8)
> T: +61 7 3365 2506
> email: S.Blomberg1_at_uq.edu.au
>
> Policies:
> 1. I will NOT analyse your data for you.
> 2. Your deadline is your problem.
>
> The combination of some data and an aching desire
> for
> an answer does not ensure that a reasonable answer
> can
> be extracted from a given body of data. - John
> Tukey.
>
>
__________________________________________________
Rresult.ps
Description: 2580773267-Rresult.ps
______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
