Maura, The workaround from https://bugzilla.novell.com/show_bug.cgi?id=330991 seems to fix this for most people (but not me): just add
export LIBXCB_ALLOW_SLOPPY_LOCK=1 to your ~/.profile file (or to /etc/profile to make it available for all users). Ted. Maura E Monville wrote on 11/03/2007 04:35 AM: > Thank you . > I followed all the path on my installation. I got the following: > [EMAIL PROTECTED]:/usr/lib/jvm/java-1.6.0.u3-sun-1.6.0.u3/jre/lib/i386> ll > total 636 > -rwxr-xr-x 1 root root 80594 2007-09-25 01:10 libjavaplugin_jni.so > -rwxr-xr-x 1 root root 297535 2007-09-25 01:10 libjavaplugin_nscp_gcc29.so > -rwxr-xr-x 1 root root 257071 2007-09-25 01:10 libjavaplugin_nscp.so > > I do not have "xawt/libmawt.so" as you can see from the above. > I do not know what that is. > I run Linux/SuSE 10.3 > > > > On 10/31/07, ecatchpole <[EMAIL PROTECTED]> wrote: > >> This is a known problem with Suse10.3 --- lots of things that use Java >> (e.g., Matlab) produce the same error message. I'm currently trying to >> fix this upon my machine, but haven't succeeded yet. Josh Triplett >> (http://bugs.sun.com/bugdatabase/view_bug.do?bug_id=6532373) suggested >> the following: >> >> ---begin--- >> I worked with jcristau and christoph4 via IRC on #debian-x, and we >> managed to >> track down the problem with broken locking in Sun Java 1.5 and 1.6. It >> only >> occurs if Java finds the Xinerama extension, at which point it does >> something >> broken with locking and triggers the assertion. If Java never finds the >> Xinerama extension, it doesn't trigger the assertion for broken locking. >> >> The following workarounds address this problem: >> >> For sun-java5-bin: >> sed -i 's/XINERAMA/FAKEEXTN/g' >> /usr/lib/jvm/java-1.5.0-sun-1.5.0.11/jre/lib/i386/xawt/libmawt.so >> ---end--- >> >> You need to modify the path for your jre. This seems to have helped >> several people. But it didn't work for me. >> >> A sure fix is going back to Suse10.2! :( >> >> Ted. >> >> -- >> Dr E.A. Catchpole >> Visiting Fellow >> Univ of New South Wales at ADFA, Canberra, Australia >> _ and University of Kent, Canterbury, England >> 'v' - >> www.pems.adfa.edu.au/~ecatchpole<http://www.pems.adfa.edu.au/%7Eecatchpole> >> / \ - fax: +61 2 6268 8786 >> m m - ph: +61 2 6268 8895 >> >> >> >> >> Maura E Monville wrote on 11/01/2007 09:43 AM: >> >>> I have downloaded and tried to install JGR - Java GUI for R - Version >>> >> 1.5. >> >>> I followed all the instructions (at least in my best resolution) and >>> installed Java latest version. >>> R installation complete fine. >>> Has anyone succeded in installing JGR on SuSE 10.3 ? >>> In the following I hade detailed the failed installation, >>> >>> As root /i did the following: >>> linux-Mimin:/usr/local/bin # ./R >>> >>> R version 2.6.0 (2007-10-03) >>> Copyright (C) 2007 The R Foundation for Statistical Computing >>> ISBN 3-900051-07-0 >>> >>> R is free software and comes with ABSOLUTELY NO WARRANTY. >>> You are welcome to redistribute it under certain conditions. >>> Type 'license()' or 'licence()' for distribution details. >>> >>> Natural language support but running in an English locale >>> >>> R is a collaborative project with many contributors. >>> Type 'contributors()' for more information and >>> 'citation()' on how to cite R or R packages in publications. >>> >>> Type 'demo()' for some demos, 'help()' for on-line help, or >>> 'help.start()' for an HTML browser interface to help. >>> Type 'q()' to quit R. >>> >>> >>> >>>> install.packages ("JGR",dep=TRUE) >>>> >>>> >>> --- Please select a CRAN mirror for use in this session --- >>> CRAN mirror >>> >>> 1: Argentina 2: Australia (QLD) >>> 3: Australia (VIC) 4: Austria >>> 5: Belgium 6: Brazil (PR) >>> 7: Brazil (MG) 8: Brazil (RJ) >>> 9: Brazil (SP 1) 10: Brazil (SP 2) >>> 11: Canada (BC) 12: Canada (ON) >>> 13: Chile (Santiago) 14: Croatia >>> 15: Czech Republic 16: Denmark >>> 17: France (Toulouse) 18: France (Lyon) >>> 19: France (Paris) 20: Germany (Bamberg) >>> 21: Germany (Mainz) 22: Germany (Muenchen) >>> 23: India (Kolkata) 24: India >>> 25: Ireland 26: Italy (Ferrara) >>> 27: Italy (Milano) 28: Italy (Padua) >>> 29: Italy (Palermo) 30: Japan (Aizu) >>> 31: Japan (Tokyo) 32: Japan (Tsukuba) >>> 33: Korea 34: Netherlands (Amsterdam 2) >>> 35: Netherlands (Amsterdam) 36: Netherlands (Utrecht) >>> 37: Norway 38: Poland (Lublin) >>> 39: Poland (Wroclaw) 40: Portugal >>> 41: Slovenia (Ljubljana) 42: South Africa >>> 43: Spain (Madrid) 44: Sweden >>> 45: Switzerland (Zuerich) 46: Switzerland (Bern) >>> 47: Taiwan (Taichung) 48: Taiwan (Taipeh) >>> 49: UK (Bristol) 50: UK (London) >>> 51: USA (CA 1) 52: USA (CA 3) >>> 53: USA (CA 2) 54: USA (IA) >>> 55: USA (IL) 56: USA (MI) >>> 57: USA (MO) 58: USA (NC) >>> 59: USA (PA 2) 60: USA (PA) >>> 61: USA (TX) 62: USA (WA) >>> >>> >>> Selection: 20 >>> trying URL ' >>> >> http://www.centervenus.com/mirrors/CRAN/src/contrib/JGR_1.5-5.tar.gz' >> >>> Content type 'application/x-gzip' length 370920 bytes (362 Kb) >>> opened URL >>> ================================================== >>> downloaded 362 Kb >>> >>> * Installing *source* package 'JGR' ... >>> ** R >>> ** inst >>> ** help >>> >>> Building/Updating help pages for package 'JGR' >>> Formats: text html latex example >>> jgr.addMenu text html latex example >>> jgr.addMenuItem text html latex example >>> jgr.addMenuSeperator text html latex example >>> supplements text html latex >>> ** building package indices ... >>> * DONE (JGR) >>> >>> The downloaded packages are in >>> /tmp/Rtmp8XtRf8/downloaded_packages >>> Updating HTML index of packages in '.Library' >>> >>> >>>> library(JGR) >>>> >>>> >>> Loading required package: rJava >>> Loading required package: JavaGD >>> Loading required package: iplots >>> R: xcb_xlib.c:52: xcb_xlib_unlock: Assertion `c-> xlib.lock' failed. >>> Aborted >>> >>> >>> Thank you in advance >>> >>> >> >> > > > -- Dr E.A. Catchpole Visiting Fellow Univ of New South Wales at ADFA, Canberra, Australia _ and University of Kent, Canterbury, England 'v' - www.pems.adfa.edu.au/~ecatchpole / \ - fax: +61 2 6268 8786 m m - ph: +61 2 6268 8895 ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
