Hi,
I wanted to send a small patch for survival documentation. So I forked,
patched and tried to build locally using R CMD build, but this failed with
errors about undefined references. Upon closer inspection, the undefined
references relate to files that give a warning when compiled through
install.packages("survival", type = "source") on Windows, for example:
D:/Rtools/mingw_32/bin/gcc -I"D:/R/R-35~1.0/include" -DNDEBUG -O3
-Wall -std=gnu99 -mtune=generic -c agfit4.c -o agfit4.o
agfit4.c: In function 'agfit4':
agfit4.c:334:20: warning: 'dtime' may be used uninitialized in this
function [-Wmaybe-uninitialized]
if (tstop[p] < dtime) break; /* no more to add */
When I build using R CMD build however, the file agfit4.c is never even
built. That explains the undefined references, but I have no clue what the
difference is between both methods.
I suspected a newer version so I downloaded the source from CRAN manually
and then tried to install locally using
install.packages("E:/GITHUBS/JoFAM/survival_2.42-3.tar.gz", repos = NULL,
type = "source")
This gives me the following error:
Error in rawToChar(block[seq_len(ns)]) :
embedded nul in string:
'\037‹\b\0¸êÔZ\0\003ì[ûo\033G’ö¯ë¿¢Á_B\036¨±¨‡í(ç\0²¬lŒµœ@’oo±Y,š3M²£yezF\022cøþöûªª»gHÊ\217\003’=\034.B\020‰\217î©®ÇW_Uµ]×ÜÚ[\235?yôûýìãç'
Yet, when using install.packages() to install the source package of
survival, that error doesn't pop up. I've hurt my brains trying to come up
with an explanation, but I can't come up with something that makes sense.
Anyone an idea?
Cheers
Joris
--
Joris Meys
Statistical consultant
Department of Data Analysis and Mathematical Modelling
Ghent University
Coupure Links 653, B-9000 Gent (Belgium)
<https://maps.google.com/?q=Coupure+links+653,%C2%A0B-9000+Gent,%C2%A0Belgium&entry=gmail&source=g>
-----------
Biowiskundedagen 2017-2018
http://www.biowiskundedagen.ugent.be/
-------------------------------
Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php
[[alternative HTML version deleted]]
______________________________________________
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
