This behavior is noted in the qr documentation, no?

rank - the rank of x as computed by the decomposition(*): always full rank in 
the LAPACK case.



> On Jan 22, 2018, at 11:21 AM, Serguei Sokol <so...@insa-toulouse.fr> wrote:
> 
> Hi,
> 
> I have noticed different rank values calculated by qr() depending on
> LAPACK parameter. When it is FALSE (default) a true rank is estimated and 
> returned.
> Unfortunately, when LAPACK is set to TRUE, the min(nrow(A), ncol(A)) is 
> returned
> which is only occasionally a true rank.
> 
> Would not it be more consistent to replace the rank in the latter case by 
> something
> based on the following pseudo code ?
> 
> d=abs(diag(qr))
> rank=sum(d >= d[1]*tol)
> 
> Here, we rely on the fact column pivoting is activated in the called lapack 
> routine (dgeqp3)
> and diagonal term in qr matrix are put in decreasing order (according to 
> their absolute values).
> 
> Serguei.
> 
> How to reproduce:
> 
> a=diag(2)
> a[2,2]=0
> qaf=qr(a, LAPACK=FALSE)
> qaf$rank # shows 1. OK it's the true rank value
> qat=qr(a, LAPACK=TRUE)
> qat$rank #shows 2. Bad, it's not the expected value.
> 
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