indeed. Makeconf isn’t in the right spot, so the correct vars aren’t set.
thank you all and sorry for the noise!
Von: "Ista Zahn" <istaz...@gmail.com>
An: "Angerer, Philipp" <philipp.ange...@helmholtz-muenchen.de>
CC: "Dirk Eddelbuettel" <e...@debian.org>, "Martyn Plummer" <plumm...@iarc.fr>,
"r-devel" <r-devel@r-project.org>
Gesendet: Mittwoch, 19. April 2017 19:10:20
Betreff: Re: [Rd] R 3.4 has broken C++11 support
Hi Philipp,
Fellow Archlinux user here. I think the problem is with the r-devel
PKGBUILD file, rather than anything wrong in R itself. The PKGBUILD
file does this:
ln -s /etc/R/${i} ${i}
when it should do
ln -s /etc/R-devel/${i} ${i}
You can fix your installed version with
cd /opt/r-devel/lib/R/etc/
sudo rm ./*
sudo ln -s /etc/R-devel/javaconf
sudo ln -s /etc/R-devel/ldpaths
sudo ln -s /etc/R-devel/Makeconf
sudo ln -s /etc/R-devel/Renviron
sudo ln -s /etc/R-devel/repositories
Or (better) fix the PKGBUILD and makepkg/pacman -U
Best,
Ista
On Wed, Apr 19, 2017 at 10:32 AM, Angerer, Philipp via R-devel
<r-devel@r-project.org> wrote:
> Hi Dirk and Martyn,
>
>> That looks fine. Can you please give a reproducible example of a package
>> that compiles correctly on R 3.3.3 but not with R 3.4.0 or R-devel.
>
> here you go, it’s pretty much the simplest package possible that needs C++11:
>
> https://github.com/flying-sheep/cxx11test
>
>> Maybe you can share with us how you configure the build of R-devel?
>
> Sure, in the mail you quoted, I already linked exactly that:
>
> https://aur.archlinux.org/cgit/aur.git/tree/PKGBUILD?h=r-devel#n40
>
>> ./configure --prefix=/opt/r-devel \
>> --libdir=/opt/r-devel/lib \
>> --sysconfdir=/etc/R-devel \
>> --datarootdir=/opt/r-devel/share \
>> rsharedir=/opt/r-devel/share/R/ \
>> rincludedir=/opt/r-devel/include/R/ \
>> rdocdir=/opt/r-devel/share/doc/R/ \
>> --with-x \
>> --enable-R-shlib \
>> --with-lapack \
>> --with-blas \
>> F77=gfortran \
>> LIBnn=lib
>
>
> Thanks and cheers,
> Philipp
>
>
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Helmholtz Zentrum Muenchen
Deutsches Forschungszentrum fuer Gesundheit und Umwelt (GmbH)
Ingolstaedter Landstr. 1
85764 Neuherberg
www.helmholtz-muenchen.de
Aufsichtsratsvorsitzende: MinDir'in Baerbel Brumme-Bothe
Geschaeftsfuehrer: Prof. Dr. Guenther Wess, Heinrich Bassler, Dr. Alfons Enhsen
Registergericht: Amtsgericht Muenchen HRB 6466
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