On 04/03/2016 9:44 AM, Wang, Zhu wrote:
Dear helpers,

I have multiple vignette files for a package, and I would like to have the 
"right" order of these files when displayed online. For instance, see below:

https://cran.r-project.org/web/packages/bst/index.html

The order of vignette links on CRAN is different from what I hoped for:

> vignette(package="bst")
Vignettes in package 'bst':

pros                    Cancer Classification Using Mass
                         Spectrometry-based Proteomics Data (source,
                         pdf)
static_khan             Classification of Cancer Types Using Gene
                         Expression Data (Long) (source, pdf)
khan                    Classification of Cancer Types Using Gene
                         Expression Data (Short) (source, pdf)
static_mcl              Classification of UCI Machine Learning Datasets
                         (Long) (source, pdf)
mcl                     Classification of UCI Machine Learning Datasets
                         (Short) (source, pdf)

The package bst already has an index.html,  and I thought that should have done 
the job, but apparently not. Any suggestions?


The index.html file should be used in the online help system, but vignette() doesn't use that, it looks in the internal database of vignettes. I don't think you can control the order in which it displays things.

This could conceivably be changed, but not by consulting your index.html file --- it is not required to follow a particular structure, so we can't find what order you want from it. One more likely possibility would be to sort alphabetically in the current locale according to filename or vignette title. So then you could get what you want by naming your vignettes 1pros, 2static_khan, etc.

It would also be possible to add a new \VignetteXXXX directive so affect collation order, but that seems like overkill.

Duncan Murdoch

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