FYI https://groups.google.com/forum/#!topic/rbigdataprogramming/k1uZWmzd1L8 or FAQ, Section 8.3, question 10 at https://github.com/snoweye/pbdMPI/blob/master/inst/doc/pbdMPI-guide.pdf?raw=true may be useful.
On Fri, Oct 3, 2014 at 9:10 PM, Simon Urbanek <simon.urba...@r-project.org> wrote: > Daniel, > > On Oct 3, 2014, at 7:17 PM, Daniel Fuka <dr...@cornell.edu> wrote: > > > Dear mac folks, > > > > I have started porting a large legacy toolset maintained in windows > > and heavily mpi laden so it can be used across platforms in R... so I > > am building a package out of it. On this note, I am noticing that > > almost all of the mpi dependent packages do not compile on the CRAN > > repositories.... with the basic issue that it appears it can not find > > mpi installed: > > > > configure: error: "Cannot find mpi.h header file" > > > > I do not see any chatter about mpi issues in the lists since the > > inception of mavericks.. and possibly this question should go to > > Simon.. but in case I missed a discussion, or if anyone has any > > suggestions on how to proceed, or what might be missing from the Rmpi, > > npRmpi, etc. packages for compilation on Mavericks, it would be > > greatly appreciated if you could let me know.. and maybe I can help > > fix the other packages as well. > > > Apple has removed MPI from recent OS X versions so it is not available > there. > > So currently, you have to install whatever MPI implementation you prefer > from sources since neither the libraries nor the toolchain are available. > What Apple used to ship was OpenMPI which still exists, but to my best > knowledge there is no official, maintained binary for OS X so on Mavericks > we have nothing to build CRAN binaries against, so you have to install > everything from sources. > > Cheers, > Simon > > ______________________________________________ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > [[alternative HTML version deleted]] ______________________________________________ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
