On 07-05-2014, at 11:23, Martin Maechler <maech...@stat.math.ethz.ch> wrote:
>>>>>> Berend Hasselman <b...@xs4all.nl>
>>>>>> on Wed, 7 May 2014 09:24:46 +0200 writes:
>
>> I am compiling the latest R-patched (Revision: 65533) Ubuntu Lucid (10.04).
>
>> Building succeeds but make check stops with an error.
>> The output in the terminal from make check:
>
>> Testing examples for package ‘base’
>> Testing examples for package ‘tools’
>> Error: testing 'tools' failed
>> Execution halted
>> make[3]: *** [test-Examples-Base] Error 1
>> make[2]: *** [test-Examples] Error 2
>> make[1]: *** [test-all-basics] Error 1
>> make: *** [check] Error 2
>
>> The last lines in the output of tests/Examples/tools-Ex.Rout.fail are
>
>>> ### ** Examples
>>>
>>> gVigns <- pkgVignettes("grid")
>>> ## Don't show:
>>> `%=f=%` <- function(a, b) normalizePath(a) == normalizePath(b)
>>> with(gVigns,
>> + stopifnot(engines == "utils::Sweave",
>> + pkgdir %=f=% system.file(package="grid"),
>> + dir %=f=% system.file(package="grid", "doc"),
>> + (n. <- length(docs)) >= 12, # have 13
>> + n. == length(names), n. == length(engines),
>> + length(msg) == 0) ) # as it is a 'base' package
>> Error: (n. <- length(docs)) >= 12 is not TRUE
>> Execution halted
>
>> How do I fix this, if possible?
>> Berend
>
> Well, as it works correctly for others,
> why don't you execute the above code in your (self installed ?) version
> of R, and find out why -- I think -- the vignettes of grid were
> not built / installed correctly ?
>
> Martin
I have the release version R-3.1.0 installed (built and checked with NO error
messages).
I don't have pdflatex installed; that is detected by configure.
I have found a difference between ……/tests/Examples/tools-Ex.R in R-3.1.0 and
R-patched.
After running this command
diff R-3.1.0-build/tests/Examples/tools-Ex.R
R-patched-build/tests/Examples/tools-Ex.R >
diff-3.1.0-3.1.0patched-tools-Ex.R.txt
the file with the differences contains this:
155a156,184
> nameEx("buildVignettes")
> ### * buildVignettes
>
> flush(stderr()); flush(stdout())
>
> ### Name: buildVignettes
> ### Title: List and Build Package Vignettes
> ### Aliases: buildVignettes pkgVignettes
> ### Keywords: utilities documentation
>
> ### ** Examples
>
> gVigns <- pkgVignettes("grid")
> ## Don't show:
> `%=f=%` <- function(a, b) normalizePath(a) == normalizePath(b)
> with(gVigns,
> stopifnot(engines == "utils::Sweave",
> pkgdir %=f=% system.file(package="grid"),
> dir %=f=% system.file(package="grid", "doc"),
> (n. <- length(docs)) >= 12, # have 13
> n. == length(names), n. == length(engines),
> length(msg) == 0) ) # as it is a 'base' package
> ## End Don't show
> stopifnot("grid" %in% gVigns$names,
> inherits(gVigns, "pkgVignettes"))
>
>
>
> cleanEx()
which would indicate that tool-Ex.R contains an additional test.
Berend
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