On 13-07-30 6:34 AM, ONKELINX, Thierry wrote:
Dear all,
I'm puzzled by the error I get from R CMD check one of my packages. I'm running
R CMD check with the --as-cran flag and it get the error both from running it
from the command line as from within Rstudio. On the same machine R CMD check
on my GRTS package (https://r-forge.r-project.org/R/?group_id=1027) works fine.
Any suggestions on how to fix this? I can send the source code in a private
email if required.
Best regards,
Thierry
Output from Rcmd.exe check --as-cran watervogels_0.3-27.tar.gz
* using log directory 'U:/svn2/watervogels/watervogels.Rcheck'
* using R version 3.0.1 Patched (2013-07-14 r63298)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* checking for file 'watervogels/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'watervogels' version '0.3-27'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Thierry Onkelinx <thierry.onkel...@inbo.be>'
New submission
Non-FOSS package license (Private package of the Research Institute for Nature
and
Forest)
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'watervogels' can be installed ... ERROR
Installation failed.
See 'U:/svn2/watervogels/watervogels.Rcheck/00install.out' for details.
Exited with status 1.
Output from 00install.out
* installing *source* package 'watervogels' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning in Sys.junction(from, to) :
cannot set reparse point
'C:\DOCUME~1\THIERR~2\LOCALS~1\Temp\RtmpMZUCyo\RLIBS_15585fa46d84/watervogels',
reason 'De in de reparsepuntbuffer aanwezige gegevens zijn ongeldig'
Error in flink(normalizePath(pkgdir), tmplib) :
cannot link from
U:\svn2\watervogels\watervogels.Rcheck\00_pkg_src\watervogels
* removing 'U:/svn2/watervogels/watervogels.Rcheck/watervogels'
A translation of the error message: The data in the reparse point buffer are
invalid.
It's hard to diagnose the cause of the error, but you can avoid the use
of junctions by setting the environment variable R_WIN_NO_JUNCTIONS to
some non-empty content, and that might avoid it.
Duncan Murdoch
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