[Rd] Lubuntu 13.04 raring ringtail: Problems installing pnmath_0.0-4

[Kjetil Halvorsen]

Hola!

This is 64bit Lubuntu 13.04, with R-3.0.0 installed from
deb http://ppa.launchpad.net/marutter/rrutter/ubuntu raring  main
via synaptic.  gcc --version
gcc (Ubuntu/Linaro 4.7.3-1ubuntu1) 4.7.3

> sessionInfo()
R version 3.0.0 (2013-04-03)
Platform: x86_64-pc-linux-gnu (64-bit)

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8
 [7] LC_PAPER=C                 LC_NAME=C
 [9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
[1] MASS_7.3-26

loaded via a namespace (and not attached):
[1] compiler_3.0.0 fortunes_1.5-0 tools_3.0.0
>
I am trying to install pnmath from the commandline (outside R), this is
what happens:
kjetil@kjetil-HP-Pavilion-dv4-Notebook-PC:~/R/src$ sudo  R CMD INSTALL
pnmath_0.0-4.tar.gz
* installing to library ‘/usr/local/lib/R/site-library’
* installing *source* package ‘pnmath’ ...
** libs
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG     -fopenmp -fpic  -O2
-pipe -g  -c bd0.c -o bd0.o
...
...
...
installing to /usr/local/lib/R/site-library/pnmath/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
Error in dyn.load(file, DLLpath = DLLpath, ...) :
  unable to load shared object
'/usr/local/lib/R/site-library/pnmath/libs/pnmath.so':
  /usr/local/lib/R/site-library/pnmath/libs/pnmath.so: undefined symbol:
PRIMFUN
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/usr/local/lib/R/site-library/pnmath’

I have installed sufficient libraries as to compile R itself from source
without problems!

Kjetil

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