Hi all
I was trying to isntall RApache last week but ran into strnge problems that no
one else seems to be experiencing. At least I couldn't find anything after
extensive googling.
First off, the machine I'm installing on looks like this:
Dell Optiplex 745
32 bit
2GB RAM
Fedora 15
httpd -v
Server version: Apache/2.2.21 (Unix)
Server built: Sep 13 2011 13:46:23
R:
R-2.14.0-3.fc15.i686
perl
perl-5.12.4-164.fc15.i686
What I did was the following:
· Downloaded the package, rapache-1.1.15.tar.gz
· Ran configure --with-apache2-apxs=/usr/sbin/apxs, make, make install.
· Added this to my httpd.conf:
o LoadModule R_module /usr/lib/httpd/modules/mod_R.so
o
o # Output R errors and warnings to the browser
o ROutputErrors
o
o # Displays information about rapache and R
o <Location /RApacheInfo>
o SetHandler r-info
o </Location>
Also added the Directory directives but commented them when I was trying to get
this to work. I figured if I couldn't see the r-info, nothing would work.
Then I navigated to /RApacheInfo on the machine and got an internal server
error. The log says this:
[Thu Jan 19 14:37:33 2012] [error] [client 10.101.77.150] rApache Notice!
No RApache Directive specified for 'SetHandler r-info'
I figured that had to be coming from the R module. I tried searching for this
error message but it seemed like no one has been experiencing it.
After this I decided to revisit the configure script. I ran it again, this time
I added the -with-R switch:
./configure --with-apache2-apxs=/usr/sbin/apxs --with-R=/usr/bin/R
I examined the output and saw that there seemed to be an error but still the
script ended with apparent success.
[root@keilir rapache-1.1.15]# ./configure --with-apache2-apxs=/usr/sbin/apxs
--with-R=/usr/bin/R
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking build system type... i686-pc-linux-gnu
checking host system type... i686-pc-linux-gnu
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for ar... ar
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for sys/types.h... (cached) yes
checking for unistd.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for uname... /bin/uname
checking for apxs2... checking for R Program... /usr/bin/R
checking for apreq2-config... no
Using libapreq2 that comes bundled with mod_R
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make sets $(MAKE)... (cached) yes
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for style of include used by make... GNU
checking dependency style of gcc... gcc3
checking build system type... i686-pc-linux-gnu
checking host system type... i686-pc-linux-gnu
checking for a sed that does not truncate output... /bin/sed
checking for egrep... grep -E
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for /usr/bin/ld option to reload object files... -r
checking for BSD-compatible nm... /usr/bin/nm -B
checking whether ln -s works... yes
checking how to recognise dependent libraries... pass_all
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... gcc3
checking how to run the C++ preprocessor... g++ -E
checking for g77... no
checking for f77... no
checking for xlf... no
checking for frt... no
checking for pgf77... no
checking for fort77... no
checking for fl32... no
checking for af77... no
checking for f90... no
checking for xlf90... no
checking for pgf90... no
checking for epcf90... no
checking for f95... f95
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether f95 accepts -g... yes
checking the maximum length of command line arguments... 32768
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for objdir... .libs
checking for ar... ar
checking for ranlib... ranlib
checking for strip... strip
checking if gcc static flag works... yes
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC
checking if gcc PIC flag -fPIC works... yes
checking if gcc supports -c -o file.o... yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
configure: creating libtool
appending configuration tag "CXX" to libtool
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC
checking if g++ PIC flag -fPIC works... yes
checking if g++ supports -c -o file.o... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
appending configuration tag "F77" to libtool
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for f95 option to produce PIC... -fPIC
checking if f95 PIC flag -fPIC works... yes
checking if f95 supports -c -o file.o... yes
checking whether the f95 linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking for ranlib... (cached) ranlib
checking for a BSD-compatible install... /usr/bin/install -c
checking whether ln -s works... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for /usr/bin/apr-1-config... yes
checking for /usr/bin/apu-1-config... yes
Can't locate Apache/Test.pm in @INC (@INC contains: /usr/local/lib/perl5
/usr/local/share/perl5 /usr/lib/perl5/vendor_perl /usr/share/perl5/vendor_perl
/usr/lib/perl5 /usr/share/perl5 .) at build/version_check.pl line 27.
setting APR_INCLUDES to " -I/usr/include/apr-1 "
setting APR_LTFLAGS to " /usr/lib/libapr-1.la"
adding "/usr/lib/libaprutil-1.la" to APR_LTFLAGS
setting APR_LIBS to " -lldap -llber -llber -ldb-4.8 -lexpat -ldb-4.8 "
adding "-lpthread" to APR_LIBS
adding "-ldl" to APR_LIBS
setting APR_LDFLAGS to " -L/usr/lib -laprutil-1 "
adding "-lapr-1" to APR_LDFLAGS
setting CPPFLAGS to " -DLINUX=2 -D_REENTRANT -D_GNU_SOURCE
-D_LARGEFILE64_SOURCE"
libapreq2 Version: 2.1.0
configure: creating ./config.status
config.status: creating Makefile
config.status: creating include/Makefile
config.status: creating library/Makefile
config.status: creating library/t/Makefile
config.status: creating module/Makefile
config.status: creating module/apache2/Makefile
config.status: creating module/apache/Makefile
config.status: creating glue/Makefile
config.status: creating build/doxygen.conf
config.status: creating include/groups.dox
config.status: creating apreq2-config
config.status: creating include/apreq_config.h
config.status: include/apreq_config.h is unchanged
config.status: executing depfiles commands
configure: creating ./config.status
config.status: creating Makefile
config.status: creating mod_R.h
config.status: executing libtool commands
I don't know if this error is critical but I couldn't get rid of it.
I'm not an R user myself. Not yet at least. Just the IT guy in my company. But
the R people can't seem to contain themselves over RApache and really want to
see it working.
Hope you can point me in the right direction.
Take care,
Gisli
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