On 21/04/2009 8:37 PM, Dan Kelley wrote:
I think what I'm pasting below will illustrate. (The git repo is behind a firewall, so I can't invite folks to download the repo to test locally. I could tar up the source and put it on a website if that would help.)

* checking if this is a source package ... OK
* checking for executable files ... WARNING
Found the following executable file(s):
   .git/objects/01/9002df908b9c97f98e6ad3dd079bee436a2d66
   .git/objects/08/ac4fdd57a77afe2f8071c2e697cbda02b276b7
   .git/objects/13/49be3ed32dd801eacbdf1cc96a7577dcdfa2d7
   .git/objects/14/45d1188fcd949bd77d5c1117906c7987fe15a7
   .git/objects/18/756ad87b639ad2123a0ac78d04daa613d16966

Okay, that helps. I don't think the problem is git versus svn, it's that you've got executable files in a directory where check shouldn't be looking. I don't think .Rbuildignore would help you.

I'll pass this on as a bug...

Duncan Murdoch




On 2009-04-21, at 9:24 PM, Duncan Murdoch wrote:

On 21/04/2009 8:10 PM, Duncan Murdoch wrote:
On 21/04/2009 7:59 PM, Dan Kelley wrote:
This may be new to 2.9.0, but I'm not sure, since I no longer have the older
version.

I notice that R CMD check has no problem with .svn directories, but it dislikes .git directories. That seems a bit of a problem, for folks like me
who sometimes use git. Perhaps this behaviour could be changed?
According to the R Extensions manual, it excludes dirs named CVS, .svn, .arch-ids, .bzr, and git. Is .git the right thing to exclude instead of git, or are both possible?
Actually, that looks like a typo in the manual: the code excludes .git, not git. I'll fix the typo, but it means I don't know what error you're talking about. Could you post instructions for reproducing?

Duncan Murdoch

The same section points out the workaround: use the .Rbuildignore file to say what isn't really part of your package.
Duncan Murdoch

Dan Kelley, PhD
Associate Professor and Graduate Coordinator
Dept. Oceanography, Dalhousie University, Halifax NS B3H 4J1
kelley....@gmail.com (1-minute path) or dan.kel...@dal.ca (2-hour path)
Phone 902 494 1694;  Fax  902 494 3877





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