-----Original Message-----
From: Robert Gentleman [mailto:[EMAIL PROTECTED]
Sent: Wed 10/12/2008 18:47
To: Legaie, Roxane
Subject: Re: Kegg.db with GOstats
Hi Roxanne,
Can you redirect your question to the mailing list. And, you can find the
answer in the mailing list archives...
best wishes
Robert
Legaie, Roxane wrote:
> Dear Robert Gentleman,
> I am currently working on Streptomyces coelicolor microarray data.
>
> I have some clusters of genes and I would like to annotate them, but as you
> may know, this organism is not yet annotated with Gene Ontologies. There is
> no database (such as at "ath1121501.db" for Arabidopsis thaliana) available
> to use with the GOstats package.
>
> So, I would like to use at least the Kegg.db package with GOstats.
> Can you tell me how to include KEGG.db ? I can't find anything about it.
>
> Thank you very much.
> Roxane LEGAIE.
>
>
>
>
> Roxane LEGAIE
> Bioinformatician
> --
> Warwick Systems Biology Centre
> Coventry House
> University of Warwick
> Coventry CV4 7AL
> U.K.
> +44 (0)24 761 50332
> [EMAIL PROTECTED]
> http://www2.warwick.ac.uk/fac/sci/systemsbiology/
>
>
--
Robert Gentleman, PhD
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, M2-B876
PO Box 19024
Seattle, Washington 98109-1024
206-667-7700
[EMAIL PROTECTED]
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