Hi, List, Sorry in advance if this turns out to be a stupid question -- I've been trying to work it out for awhile, and I don't have any new ideas -- I'm very new to R documentation/ LATEX.
I am running "R CMD check " on a package that I am trying to write; the only warning is: * checking for missing documentation entries ... WARNING Undocumented data sets: Einter KG All user-level objects in a package should have documentation entries. See the chapter 'Writing R documentation files' in manual 'Writing R Extensions'. I have checked "Writing R Extensions" manual, found here: http://stuff.mit.edu/afs/sipb/project/r-project/arch/i386_rhel3/lib/R/doc/manual/R-exts.html As instructed in the Documenting data sets, Einter and KG both have corresponding .Rd files in the PACKAGE/man/ directory. The contents of the applicable .Rd files are pasted below. Does anyone have any suggestions! Thanks very much in advance! Charles PACKAGE/man/KG.Rd: \name{KG} \docType{data} \alias{gene positions} \title{Position of known genes in the first 2 Mb of human chromosome 1-3. } \description{ A data frame with 146 observations on the following 5 variables. \describe{ \item{\code{name}}{a factor with levels \code{AB003592} \code{AB007916} \code{AB010962} \code{AB033099} \code{AB051503} \code{AB052096} \code{AF002246} \code{AF006011} \code{AF057061} \code{AF057062} \code{AF067519} \code{AF070597} \code{AF070603} \code{AF116687} \code{AF153686} \code{AF161351} \code{AF178986} \code{AF241229} \code{AF250320} \code{AF274944} \code{AF305818} \code{AF343078} \code{AF346307} \code{AF461903} \code{AF469129} \code{AF490905} \code{AJ003029} \code{AJ278736} \code{AK000549} \code{AK000591} \code{AK000615} \code{AK000886} \code{AK001208} \code{AK021939} \code{AK023110} \code{AK023114} \code{AK023356} \code{AK024448} \code{AK024481} \code{AK027269} \code{AK027277} \code{AK055593} \code{AK056065} \code{AK074112} \code{AK075017} \code{AK091144} \code{AK093189} \code{AK093239} \code{AK093438} \code{AK093927} \code{AK093954} \code{AK094155} \code{AK094502} \code{AK094642} \code{AK097327} \code{AK123641} \code{AK124054} \code{AK124125} \code{AK125828} \code{AK125883} \code{AK126501} \code{AK126870} \code{AK127149} \code{AK127994} \code{AK128042} \code{AK128271} \code{AK128357} \code{AK128434} \code{AK128780} \code{AK128833} \code{AL049665} \code{AL050373} \code{AL136813} \code{AL137269} \code{AL137714} \code{AL834179} \code{AL834441} \code{AY037150} \code{AY050570} \code{AY116620} \code{AY217347} \code{AY358391} \code{AY358490} \code{AY358517} \code{AY358544} \code{AY358877} \code{BC000675} \code{BC003543} \code{BC004186} \code{BC004366} \code{BC004874} \code{BC007422} \code{BC008041} \code{BC008070} \code{BC008374} \code{BC008375} \code{BC008788} \code{BC009938} \code{BC013904} \code{BC014101} \code{BC014270} \code{BC014316} \code{BC014464} \code{BC015393} \code{BC015400} \code{BC015549} \code{BC016010} \code{BC016333} \code{BC017225} \code{BC017762} \code{BC018701} \code{BC018779} \code{BC020699} \code{BC021851} \code{BC022808} \code{BC025719} \code{BC029929} \code{BC030778} \code{BC031359} \code{BC032379} \code{BC034304} \code{BC046345} \code{BC047001} \code{BC048328} \code{BC050454} \code{BC051194} \code{BC059409} \code{BC062579} \code{BC063107} \code{BC063682} \code{BC066360} \code{BT007082} \code{BT007136} \code{BT007305} \code{BX537637} \code{J02969} \code{M37712} \code{M83653} \code{NM_003327} \code{X04526} \code{X75962} \code{Y16846}} \item{\code{chrom}}{a factor with levels \code{chr1} \code{chr2} \code{chr3}} \item{\code{strand}}{a factor with levels \code{-} \code{+}} \item{\code{txStart}}{a numeric vector} \item{\code{txEnd}}{a numeric vector} } } \usage{data(KG)} \format{data frame} \source{The UCSC genome browser (http://genome.ucsc.edu).} \keyword{datasets} PACKAGE/man/Einter.Rd: \name{Einter} \docType{data} \alias{intensities} \title{Sample intensities for human promoter tiling array. } \description{ Einter is a data frame consisting of 3 position information columns (Unique ID, Start position of probe, Chromosome) and normalized intensity data from 4 samples. Data is given for the first 3Mb of human chromosomes 1-3. >From the Affymetrix human promoter tiling array v02-3. } \usage{data(Einter)} \format{data frame} \source{Unpublished data, courtosy of Yanli Zhang and Frank Middleton.} \keyword{datasets} ______________________________________________ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
