On Mon, 5 May 2008, Patrick Giraudoux wrote:
Prof Brian Ripley a écrit :
It seems likely that the contents of 'pgirmess' under Linux are incomplete.
There's a recent version of pgirmess on CRAN, and that works under Linux. I
suggest you try that (start with the tarball, perhaps).
Sorry prof Ripley, but this is the same version as the one on CRAN (I am the
developper)... Actually Kurt Hornik tried it and it went through with his
debian yesterday (after some troubles -solved- about encoding and the new R
Yes, I do know (I solved them).
6.7.0), Uwe Ligges sent me an automated message telling that it has also
been built under Windows successfully (as it was under my own Windows
version). I have also checked that PermTest was in the package. So I suppose
that it has something to do with Ubuntu... but don't know how to debug
this...
I suggest you do as I suggest, for the most likely explanation is that
this is not the same set of files.
On Mon, 5 May 2008, Patrick Giraudoux wrote:
Dear listers,
I was used to package pgirmess under Windows with everything OK, but, for
the first time, I had a trial this afternoon on Ubuntu 7.10 gutsy (I have
a double boot computer and work more and more under unix) and R 2.7.0.
Everything went OK except this:
sudo R CMD check pgirmess
Do you really want to be doing this under root? I see no reason to do so
-- just make sure you have a writeable current directory for your account.
.....
* checking examples ... ERROR
Running examples in 'pgirmess-Ex.R' failed.
The error most likely occurred in:
### * PermTest
flush(stderr()); flush(stdout())
### Name: PermTest
### Title: Permutation test for lm, lme and glm (binomial and Poisson)
### objects
### Aliases: PermTest PermTest.lm PermTest.lme PermTest.glm
print.PermTest
### Keywords: htest
### ** Examples
library(MASS)
mylm<-lm(Postwt~Prewt,data=anorexia)
PermTest(mylm,B=250)
Error: could not find function "PermTest"
Execution halted
If I run R CMD check --no-examples pgirmess, everything comes OK. Seems
again that this check makes problem. I googled a bit on R-devel but did
not find any understandable post on that...
Any idea about what happens ? (please consider if I can write some lines
and build a package, I am *not* an advanced fellow in matter of
packaging... and just know something about running the commands 'R CMD
check' and R CMD build...)
Thanks in advance,
Patrick
--
Brian D. Ripley, [EMAIL PROTECTED]
Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel: +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UK Fax: +44 1865 272595
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