install packages RMySQL fail. System Fedora Core 6 x86_64
see down. It's bug or incomplete install MySQL? Juan. ______________________________________________________________ PROMPT MySQL $ mysql Welcome to the MySQL monitor. Commands end with ; or \g. Your MySQL connection id is 2 to server version: 5.0.22 Type 'help;' or '\h' for help. Type '\c' to clear the buffer. mysql> ______________________________________________________________ PROMPT R INSTALLING RMySQL > install.packages() tentando a URL 'http://www.insecta.ufv.br/CRAN/src/contrib/RMySQL_0.5-10.tar.gz' Content type 'application/x-tar' length 142671 bytes URL aberta ================================================== downloaded 139Kb * Installing *source* package 'RMySQL' ... creating cache ./config.cache checking how to run the C preprocessor... cc -E checking for compress in -lz... yes checking for getopt_long in -lc... yes checking for mysql_init in -lmysqlclient... no checking for mysql.h... no checking for mysql_init in -lmysqlclient... no checking for mysql_init in -lmysqlclient... no checking for mysql_init in -lmysqlclient... no checking for mysql_init in -lmysqlclient... no checking for mysql_init in -lmysqlclient... no checking for /usr/local/include/mysql/mysql.h... no checking for /usr/include/mysql/mysql.h... yes Configuration error: could not find the MySQL installation include and/or library directories. Manually specify the location of the MySQL libraries and the header files and re-run R CMD INSTALL. INSTRUCTIONS: 1. Define and export the 2 shell variables PKG_CPPFLAGS and PKG_LIBS to include the directory for header files (*.h) and libraries, for example (using Bourne shell syntax): export PKG_CPPFLAGS="-I<MySQL-include-dir>" export PKG_LIBS="-L<MySQL-lib-dir> -lmysqlclient" Re-run the R INSTALL command: R CMD INSTALL RMySQL_<version>.tar.gz 2. Alternatively, you may pass the configure arguments --with-mysql-dir=<base-dir> (distribution directory) or --with-mysql-inc=<base-inc> (where MySQL header files reside) --with-mysql-lib=<base-lib> (where MySQL libraries reside) in the call to R INSTALL --configure-args='...' R CMD INSTALL --configure-args='--with-mysql-dir=DIR' RMySQL_<version>.tar.gz ERROR: configuration failed for package 'RMySQL' ** Removing '/usr/lib64/R/library/RMySQL' The downloaded packages are in /tmp/Rtmpioa2vr/downloaded_packages Warning message: installation of package 'RMySQL' had non-zero exit status in: install.packages() ______________________________________________ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
