Dear R-developers,
I am trying to reproduce the autoconf.ac example from R-ext and fail.
My autoconf file looks like this
[autoconf.ac]
# original by Friedrich Leisch, much changed by BDR
AC_INIT([SBMLodeSolveR])
dnl Select an optional include path, from a configure option
dnl or from an environment variable.
AC_ARG_WITH([sbmlode-include],
AC_HELP_STRING([--with-sbmlode-include=INCLUDE_PATH],
[the location of SBMLODE header files]),
[sbmlode_include_path=$withval])
if test [ -n "$sbmlode_include_path" ] ; then
AC_SUBST([CPPFLAGS],["-I${sbmlode_include_path} ${CPPFLAGS}"])
else
if test [ -n "${SBMLODE_INCLUDE}" ] ; then
AC_SUBST([CPPFLAGS],["-I${SBMLODE_INCLUDE} ${CPPFLAGS}"])
fi
fi
dnl ditto for a library path
AC_ARG_WITH([sbmlode-lib],AC_HELP_STRING([--with-sbmlode-lib=LIB_PATH],[the
location of libsbmlode libraries]),[sbmlode_lib_path=$withval])
if test [ -n "$sbmlode_lib_path" ] ; then
AC_SUBST([LIBS],[" -L${sbmlode_lib_path} ${LIBS}"])
else
if test [ -n "${SBMLODE_LIBS}" ] ; then
AC_SUBST([LIBS],["-I${SBMLODE_LIBS} ${LIBS}"])
fi
fi
dnl Now find the compiler and compiler flags to use
: ${R_HOME=`R RHOME`}
if test -z "${R_HOME}"; then
echo "could not determine R_HOME"
exit 1
fi
CC=`"${R_HOME}/bin/R" CMD config CC`
CFLAGS=`"${R_HOME}/bin/R" CMD config CFLAGS`
dnl substitute CPPFLAGS and LIBS
AC_SUBST(CPPFLAGS)
AC_SUBST(LIBS)
dnl and do subsitution in the src/Makevars.in
AC_OUTPUT(src/Makevars)
[end autoconf.ac]
I rund autoconf..
[Makevars.in]
[EMAIL PROTECTED]@
[EMAIL PROTECTED]@
[end-Makevars.in]
I rund R CMD with
R CMD INSTALL
--configure-args='--with-sbmlode-lib=/data/opt/sbmlodesolve/include \
--with-sbmlode-include=/data/opt/sbmlodesolve/lib' \
SBMLodeSolveR
What I am getting is a
[Makvars]
PKG_CFLAGS=
PKG_LIBS= -L/data/opt/sbmlodesolve/include
[end-Makevars]
and the following warnings
[warnings]
* Installing *source* package 'SBMLodeSolveR' ...
configure: WARNING: you should use --build, --host, --target
configure: WARNING: invalid host type: /data/opt/sbmlodesolve/lib
configure: creating ./config.status
config.status: creating src/Makevars
*
[end-warnings]
Any suggestions?
Eryk
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