tb@ found that misc/openbabel has a hidden dep on math/eigen3. Diff below addresses this. Minor of libopenbabel requires a bump because of additions of symbols.
Tested on amd64. Run tested with x11/xdrawchem. Comments/OK? diff --git Makefile Makefile index 32758c97397..21ac8b7d578 100644 --- Makefile +++ Makefile @@ -1,6 +1,7 @@ COMMENT= chemistry file translation program V= 3.1.1 +REVISION= 0 DISTNAME= openbabel-${V} CATEGORIES= misc @@ -8,7 +9,7 @@ CATEGORIES= misc SHARED_LIBS += coordgen 0.0 \ inchi 0.0 \ maeparser 0.0 \ - openbabel 6.0 + openbabel 6.1 HOMEPAGE= https://openbabel.org @@ -34,6 +35,8 @@ LIB_DEPENDS= devel/boost \ graphics/cairo \ textproc/libxml +BUILD_DEPENDS= math/eigen3 + CONFIGURE_ARGS= -DBUILD_GUI=OFF SEPARATE_BUILD= No diff --git pkg/PLIST pkg/PLIST index d77e9e5fa81..4bf64c2796e 100644 --- pkg/PLIST +++ pkg/PLIST @@ -1,5 +1,6 @@ @bin bin/obabel @bin bin/obconformer +@bin bin/obdistgen @bin bin/obenergy @bin bin/obfit @bin bin/obfitall @@ -9,6 +10,7 @@ @bin bin/obmm @bin bin/obprobe @bin bin/obprop +@bin bin/obrms @bin bin/obrotamer @bin bin/obrotate @bin bin/obspectrophore @@ -48,6 +50,12 @@ include/maeparser/MaeParserConfig.hpp include/maeparser/Reader.hpp include/maeparser/Writer.hpp include/openbabel3/ +include/openbabel3/LBFGS/ +include/openbabel3/LBFGS.h +include/openbabel3/LBFGS/LineSearchBacktracking.h +include/openbabel3/LBFGS/LineSearchBracketing.h +include/openbabel3/LBFGS/LineSearchNocedalWright.h +include/openbabel3/LBFGS/Param.h include/openbabel3/openbabel/ include/openbabel3/openbabel/alias.h include/openbabel3/openbabel/atom.h @@ -184,6 +192,7 @@ lib/openbabel/${V}/ @so lib/openbabel/${V}/cmlformat.so @so lib/openbabel/${V}/cmlreactformat.so @so lib/openbabel/${V}/cofformat.so +@so lib/openbabel/${V}/confabreport.so @so lib/openbabel/${V}/copyformat.so @so lib/openbabel/${V}/crkformat.so @so lib/openbabel/${V}/crystal09format.so