> > [PATCH 5/7] Added Array::remove (and Object::arrayRemove)
> Please add a return if the range is wrong and DEBUG_MEM is not defined.
> Also please use a memmove instead of a for loop to move the elems to the left

> > [PATCH 6/7] Basic support for Annot appearance stream removal and
> > invalidation poppler/Annot.cc
> Please add braces {} to single line if/elses

> > [PATCH 7/7] Annotation removal
> Same thing about braces here
Thank you Albert. These are the patches with the corrections you suggested.

                                          
From 6e9f42387013fe5c385edac169500be7f4c6d59c Mon Sep 17 00:00:00 2001
From: Fabio D'Urso <[email protected]>
Date: Mon, 19 Mar 2012 00:05:49 +0100
Subject: [PATCH 1/3] Added Array::remove (and Object::arrayRemove)

---
 poppler/Array.cc |   13 +++++++++++++
 poppler/Array.h  |    4 ++++
 poppler/Object.h |    5 +++++
 3 files changed, 22 insertions(+), 0 deletions(-)

diff --git a/poppler/Array.cc b/poppler/Array.cc
index e7ec4e7..cb22432 100644
--- a/poppler/Array.cc
+++ b/poppler/Array.cc
@@ -14,6 +14,7 @@
 // under GPL version 2 or later
 //
 // Copyright (C) 2005 Kristian Høgsberg <[email protected]>
+// Copyright (C) 2012 Fabio D'Urso <[email protected]>
 //
 // To see a description of the changes please see the Changelog file that
 // came with your tarball or type make ChangeLog if you are building from git
@@ -64,6 +65,18 @@ void Array::add(Object *elem) {
   ++length;
 }
 
+void Array::remove(int i) {
+  if (i < 0 || i >= length) {
+#ifdef DEBUG_MEM
+    abort();
+#else
+    return;
+#endif
+  }
+  --length;
+  memmove( elems + i, elems + i + 1, sizeof(elems[0]) * (length - i) );
+}
+
 Object *Array::get(int i, Object *obj) {
   if (i < 0 || i >= length) {
 #ifdef DEBUG_MEM
diff --git a/poppler/Array.h b/poppler/Array.h
index a6aca26..666a409 100644
--- a/poppler/Array.h
+++ b/poppler/Array.h
@@ -14,6 +14,7 @@
 // under GPL version 2 or later
 //
 // Copyright (C) 2005 Kristian Høgsberg <[email protected]>
+// Copyright (C) 2012 Fabio D'Urso <[email protected]>
 //
 // To see a description of the changes please see the Changelog file that
 // came with your tarball or type make ChangeLog if you are building from git
@@ -54,6 +55,9 @@ public:
   // Add an element.
   void add(Object *elem);
 
+  // Remove an element by position
+  void remove(int i);
+
   // Accessors.
   Object *get(int i, Object *obj);
   Object *getNF(int i, Object *obj);
diff --git a/poppler/Object.h b/poppler/Object.h
index a67b403..c885d73 100644
--- a/poppler/Object.h
+++ b/poppler/Object.h
@@ -17,6 +17,7 @@
 // Copyright (C) 2008 Kees Cook <[email protected]>
 // Copyright (C) 2008, 2010 Albert Astals Cid <[email protected]>
 // Copyright (C) 2009 Jakub Wilk <[email protected]>
+// Copyright (C) 2012 Fabio D'Urso <[email protected]>
 //
 // To see a description of the changes please see the Changelog file that
 // came with your tarball or type make ChangeLog if you are building from git
@@ -205,6 +206,7 @@ public:
   // Array accessors.
   int arrayGetLength();
   void arrayAdd(Object *elem);
+  void arrayRemove(int i);
   Object *arrayGet(int i, Object *obj);
   Object *arrayGetNF(int i, Object *obj);
 
@@ -273,6 +275,9 @@ inline int Object::arrayGetLength()
 inline void Object::arrayAdd(Object *elem)
   { OBJECT_TYPE_CHECK(objArray); array->add(elem); }
 
+inline void Object::arrayRemove(int i)
+  { OBJECT_TYPE_CHECK(objArray); array->remove(i); }
+
 inline Object *Object::arrayGet(int i, Object *obj)
   { OBJECT_TYPE_CHECK(objArray); return array->get(i, obj); }
 
-- 
1.7.6.5

From 3a42a1a0f018a318b44bb7bf48e5b059ed796f18 Mon Sep 17 00:00:00 2001
From: Fabio D'Urso <[email protected]>
Date: Mon, 19 Mar 2012 19:10:20 +0100
Subject: [PATCH 2/3] Basic support for Annot appearance stream removal and
 invalidation

---
 poppler/Annot.cc |  176 +++++++++++++++++++++++++++++++++++++++--------------
 poppler/Annot.h  |   26 +++++++-
 2 files changed, 152 insertions(+), 50 deletions(-)

diff --git a/poppler/Annot.cc b/poppler/Annot.cc
index 405f5f6..4b4d0bd 100644
--- a/poppler/Annot.cc
+++ b/poppler/Annot.cc
@@ -776,6 +776,98 @@ AnnotIconFit::AnnotIconFit(Dict* dict) {
 }
 
 //------------------------------------------------------------------------
+// AnnotAppearance
+//------------------------------------------------------------------------
+
+AnnotAppearance::AnnotAppearance(PDFDoc *docA, Dict *dict) {
+  xref = docA->getXRef();
+  appearDict = new Dict(dict);
+}
+
+void AnnotAppearance::getAppearanceStream(AnnotAppearance::AnnotAppearanceType type, const char *state, Object *dest) {
+  Object apData;
+  // Obtain dictionary or stream associated to appearance type
+  if (type == appearRollover && appearDict->hasKey("R")) {
+    appearDict->lookupNF("R", &apData);
+  } else if (type == appearDown && appearDict->hasKey("D")) {
+    appearDict->lookupNF("D", &apData);
+  } else {
+    appearDict->lookupNF("N", &apData); // Normal appearance
+  }
+
+  // Search state if it's a subdictionary
+  if (apData.isDict() && state) {
+    Object obj1;
+    apData.dictLookupNF(state, &obj1);
+    apData.free();
+    obj1.copy(&apData);
+    obj1.free();
+  }
+
+  if (apData.isRef()) {
+    apData.copy(dest); // Return reference to stream
+  } else {
+    dest->initNull();
+  }
+
+  apData.free();
+}
+
+GooString * AnnotAppearance::getStateKey(int i) {
+  Object obj1;
+  GooString * res = NULL;
+  appearDict->lookupNF("N", &obj1);
+  if (obj1.isDict()) {
+    res = new GooString(obj1.dictGetKey(i));
+  }
+  obj1.free();
+  return res;
+}
+
+int AnnotAppearance::getNumStates() {
+  Object obj1;
+  int res = 0;
+  appearDict->lookupNF("N", &obj1);
+  if (obj1.isDict()) {
+    res = obj1.dictGetLength();
+  }
+  obj1.free();
+  return res;
+}
+
+// Removes stream if obj is a Ref, or removes pointed streams if obj is a Dict
+void AnnotAppearance::removeStateStreams(Object *obj1) {
+  // TODO: Remove XObject resources, check for XObjects shared by multiple
+  //       annotations, delete streams from name table (if any)
+  if (obj1->isRef()) {
+    xref->removeIndirectObject(obj1->getRef());
+  } else if (obj1->isDict()) {
+    const int size = obj1->dictGetLength();
+    for (int i = 0; i < size; ++i) {
+      Object obj2;
+      obj1->dictGetValNF(i, &obj2);
+      if (obj2.isRef()) {
+        xref->removeIndirectObject(obj2.getRef());
+      }
+      obj2.free();
+    }
+  }
+}
+
+void AnnotAppearance::removeAllStreams() {
+  Object obj1;
+  appearDict->lookupNF("N", &obj1);
+  removeStateStreams(&obj1);
+  obj1.free();
+  appearDict->lookupNF("R", &obj1);
+  removeStateStreams(&obj1);
+  obj1.free();
+  appearDict->lookupNF("D", &obj1);
+  removeStateStreams(&obj1);
+  obj1.free();
+}
+
+//------------------------------------------------------------------------
 // AnnotAppearanceCharacs
 //------------------------------------------------------------------------
 
@@ -912,13 +1004,12 @@ Annot::Annot(PDFDoc *docA, Dict *dict, Object *obj) {
 }
 
 void Annot::initialize(PDFDoc *docA, Dict *dict) {
-  Object apObj, asObj, obj1, obj2, obj3;
+  Object apObj, asObj, obj1, obj2;
 
-  appRef.num = 0;
-  appRef.gen = 65535;
   ok = gTrue;
   doc = docA;
   xref = doc->getXRef();
+  appearDict = NULL;
   appearState = NULL;
   appearBuf = NULL;
   fontSize = 0;
@@ -995,22 +1086,25 @@ void Annot::initialize(PDFDoc *docA, Dict *dict) {
   }
   obj1.free();
 
-  //----- get the appearance state
-
+  //----- get the annotation appearance dictionary
   dict->lookup("AP", &apObj);
+  if (apObj.isDict()) {
+    appearDict = new AnnotAppearance(doc, apObj.getDict());
+  }
+  apObj.free();
+
+  //----- get the appearance state
   dict->lookup("AS", &asObj);
   if (asObj.isName()) {
     appearState = new GooString(asObj.getName());
-  } else if (apObj.isDict()) {
-    if (apObj.dictLookup("N", &obj1)->isDict()) {
-      error (errSyntaxError, -1, "Invalid or missing AS value in annotation containing one or more appearance subdictionaries");
-      // AS value is required in this case, but if the
-      // N dictionary contains only one entry
-      // take it as default appearance.
-      if (obj1.dictGetLength() == 1)
-        appearState = new GooString(obj1.dictGetKey(0));
+  } else if (appearDict && appearDict->getNumStates() != 0) {
+    error (errSyntaxError, -1, "Invalid or missing AS value in annotation containing one or more appearance subdictionaries");
+    // AS value is required in this case, but if the
+    // N dictionary contains only one entry
+    // take it as default appearance.
+    if (appearDict->getNumStates() == 1) {
+      appearState = appearDict->getStateKey(0);
     }
-    obj1.free();
   }
   if (!appearState) {
     appearState = new GooString("Off");
@@ -1018,22 +1112,9 @@ void Annot::initialize(PDFDoc *docA, Dict *dict) {
   asObj.free();
 
   //----- get the annotation appearance
-
-  if (apObj.isDict()) {
-    apObj.dictLookup("N", &obj1);
-    apObj.dictLookupNF("N", &obj2);
-    if (obj1.isDict()) {
-      if (obj1.dictLookupNF(appearState->getCString(), &obj3)->isRef()) {
-	obj3.copy(&appearance);
-      }
-      obj3.free();
-    } else if (obj2.isRef()) {
-      obj2.copy(&appearance);
-    }
-    obj1.free();
-    obj2.free();
+  if (appearDict) {
+    appearDict->getAppearanceStream(AnnotAppearance::appearNormal, appearState->getCString(), &appearance);
   }
-  apObj.free();
 
   //----- parse the border style
   if (dict->lookup("BS", &obj1)->isDict()) {
@@ -1218,9 +1299,6 @@ void Annot::setAppearanceState(const char *state) {
   if (!state)
     return;
 
-  if (appearState && appearState->cmp(state) == 0)
-    return;
-
   delete appearState;
   appearState = new GooString(state);
 
@@ -1229,23 +1307,25 @@ void Annot::setAppearanceState(const char *state) {
   update ("AS", &obj1);
 
   // The appearance state determines the current appearance stream
-  Object obj2;
-  if (annotObj.dictLookup("AP", &obj2)->isDict()) {
-    Object obj3;
-
-    if (obj2.dictLookup("N", &obj3)->isDict()) {
-      Object obj4;
+  appearance.free();
+  if (appearDict) {
+    appearDict->getAppearanceStream(AnnotAppearance::appearNormal, appearState->getCString(), &appearance);
+  } else {
+    appearance.initNull();
+  }
+}
 
-      appearance.free();
-      if (obj3.dictLookupNF(state, &obj4)->isRef())
-        obj4.copy(&appearance);
-      else
-        appearance.initNull();
-      obj4.free();
-    }
-    obj3.free();
+void Annot::invalidateAppearance() {
+  if (appearDict) { // Remove existing appearance streams
+    appearDict->removeAllStreams();
   }
-  obj2.free();
+  delete appearDict;
+  appearDict = NULL;
+  Object obj1;
+  obj1.initNull();
+  update ("AP", &obj1); // Removes AP
+  update ("AS", &obj1); // Removes AS
+  setAppearanceState("Off"); // Default value
 }
 
 double Annot::getXMin() {
@@ -1292,6 +1372,8 @@ Annot::~Annot() {
   if (modified)
     delete modified;
 
+  delete appearDict;
+
   appearance.free();
 
   if (appearState)
diff --git a/poppler/Annot.h b/poppler/Annot.h
index 8d40a8a..9e2754a 100644
--- a/poppler/Annot.h
+++ b/poppler/Annot.h
@@ -368,7 +368,25 @@ public:
     appearDown
   };
 
-  AnnotAppearance(Dict *dict);
+  AnnotAppearance(PDFDoc *docA, Dict *dict);
+
+  // State is ignored if no subdictionary is present
+  void getAppearanceStream(AnnotAppearanceType type, const char *state, Object *dest);
+
+  // Access keys in normal appearance subdictionary (N)
+  GooString * getStateKey(int i);
+  int getNumStates();
+
+  // Removes all associated streams in the xref table. Caller is required to
+  // reset parent annotation's AP and AS after this call.
+  void removeAllStreams();
+
+private:
+  void removeStateStreams(Object *state);
+
+protected:
+  XRef *xref;                   // the xref table for this PDF file
+  Dict *appearDict;             // Annotation's AP
 };
 
 //------------------------------------------------------------------------
@@ -504,6 +522,9 @@ public:
 
   void setAppearanceState(const char *state);
 
+  // Delete appearance stream and reset appearance state
+  void invalidateAppearance();
+
   // getters
   PDFDoc *getDoc() const { return doc; }
   XRef *getXRef() const { return xref; }
@@ -564,8 +585,7 @@ protected:
   GooString *name;                  // NM
   GooString *modified;              // M
   Guint flags;                      // F (must be a 32 bit unsigned int)
-  //Dict *appearDict;                 // AP (should be correctly parsed)
-  Ref appRef;                       //the reference to the indirect appearance object in XRef 
+  AnnotAppearance *appearDict;      // AP
   Object appearance;     // a reference to the Form XObject stream
                          //   for the normal appearance
   GooString *appearState;           // AS
-- 
1.7.6.5

From 0c9baf1d467ef5396a6ffaa93f9022d5b5bb51df Mon Sep 17 00:00:00 2001
From: Fabio D'Urso <[email protected]>
Date: Tue, 20 Mar 2012 00:56:50 +0100
Subject: [PATCH 3/3] Annotation removal

---
 poppler/Annot.cc |   17 +++++++++++++++++
 poppler/Annot.h  |    1 +
 poppler/Page.cc  |   36 ++++++++++++++++++++++++++++++++++++
 poppler/Page.h   |    2 ++
 4 files changed, 56 insertions(+), 0 deletions(-)

diff --git a/poppler/Annot.cc b/poppler/Annot.cc
index 4b4d0bd..6dd82c3 100644
--- a/poppler/Annot.cc
+++ b/poppler/Annot.cc
@@ -5712,6 +5712,23 @@ void Annots::appendAnnot(Annot *annot) {
   }
 }
 
+GBool Annots::removeAnnot(Annot *annot) {
+  int idx = -1;
+  // Search annot and remove it by swapping with last element
+  for (int i = 0; idx == -1 && i < nAnnots; i++) {
+    if (annots[i] == annot) {
+      idx = i;
+    }
+  }
+  if (idx == -1) {
+    return gFalse;
+  } else {
+    annots[idx] = annots[--nAnnots];
+    annot->decRefCnt();
+    return gTrue;
+  }
+}
+
 Annot *Annots::createAnnot(Dict* dict, Object *obj) {
   Annot *annot = NULL;
   Object obj1;
diff --git a/poppler/Annot.h b/poppler/Annot.h
index 9e2754a..534c00e 100644
--- a/poppler/Annot.h
+++ b/poppler/Annot.h
@@ -1329,6 +1329,7 @@ public:
   int getNumAnnots() { return nAnnots; }
   Annot *getAnnot(int i) { return annots[i]; }
   void appendAnnot(Annot *annot);
+  GBool removeAnnot(Annot *annot);
 
 private:
   Annot* createAnnot(Dict* dict, Object *obj);
diff --git a/poppler/Page.cc b/poppler/Page.cc
index 48ed647..a2a4a0d 100644
--- a/poppler/Page.cc
+++ b/poppler/Page.cc
@@ -394,6 +394,42 @@ void Page::addAnnot(Annot *annot) {
   annot->setPage(&pageRef, num);
 }
 
+// Note: Caller is responsible for deleting popup and appearance streams too
+void Page::removeAnnot(Annot *annot) {
+  Ref annotRef = annot->getRef();
+  Object annArray;
+
+  getAnnots(&annArray);
+  if (annArray.isArray()) {
+    int idx = -1;
+    // Get annotation position
+    for (int i = 0; idx == -1 && i < annArray.arrayGetLength(); ++i) {
+      Object tmp;
+      Ref currAnnot = annArray.arrayGetNF(i, &tmp)->getRef();
+      tmp.free();
+      if (currAnnot.num == annotRef.num && currAnnot.gen == annotRef.gen) {
+        idx = i;
+      }
+    }
+
+    if (idx == -1) {
+      error(errInternal, -1, "Annotation doesn't belong to this page");
+      annArray.free();
+      return;
+    }
+    annots->removeAnnot(annot); // Gracefully fails on popup windows
+    annArray.arrayRemove(idx);
+    xref->removeIndirectObject(annotRef);
+
+    if (annotsObj.isRef()) {
+      xref->setModifiedObject (&annArray, annotsObj.getRef());
+    } else {
+      xref->setModifiedObject (&pageObj, pageRef);
+    }
+  }
+  annArray.free();
+}
+
 Links *Page::getLinks() {
   return new Links(getAnnots());
 }
diff --git a/poppler/Page.h b/poppler/Page.h
index 70141d0..e22353b 100644
--- a/poppler/Page.h
+++ b/poppler/Page.h
@@ -171,6 +171,8 @@ public:
   Object *getAnnots(Object *obj) { return annotsObj.fetch(xref, obj); }
   // Add a new annotation to the page
   void addAnnot(Annot *annot);
+  // Remove an existing annotation from the page
+  void removeAnnot(Annot *annot);
 
   // Return a list of links.
   Links *getLinks();
-- 
1.7.6.5

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