Thanks Barry, that was the problem!
Thank you,
Miguel
On Jun 24, 2024, at 12:56 PM, Barry Smith <bsm...@petsc.dev> wrote:
The error is coming from the parallel SNES used by TS TSTheta_SNESSolve()
not your small SNES solver but TSTheta_SNESSolve()
Process 7 uses [7]PETSC ERROR: #4 SNESLineSearchApply_CP() while the rest
uses _BT(). I think this causes the problem since they are different algorithms
using different MPI.
Are you perhaps setting somewhere the line search to use? Options database
or someway that different processes will get a different value?
On Jun 24, 2024, at 2:50 PM, MIGUEL MOLINOS PEREZ <mmoli...@us.es> wrote:
This Message Is From an External Sender
This message came from outside your organization.
Dear all,
I am trying to assemble a matrix A with coefficients which I need to assemble
the RHS (F) and its Jacobian (J) in a TS type of problem.
Determining each coefficient of A involves the resolution of a small non-linear
problem (1 dof) using the serial version of SNES. By the way, the matrix A is
of the type “MATMPIAIJ”.
The weird part is, if I pass the matrix A to the TS routine inside of a
user-context structure, without even accessing to the values inside of A, I got
the following error message:
> [1]PETSC ERROR: Petsc has generated inconsistent data
> [1]PETSC ERROR: MPI_Allreduce() called in different locations (code lines)
> on different processors
But if I comment out the line which calls the SNES routine used to evaluate the
coefficients inside of A, I don’t get the error message.
Some additional context:
- The SNES routine is called once at a time inside of each rank.
- I use PetscCall(SNESCreate(PETSC_COMM_SELF, &snes));
- The vectors inside of the SNES function are defined as follows:
VecCreateSeq(PETSC_COMM_SELF, 1, &Y)
- All the input fields for SNES are also sequential.
Any feedback is greatly appreciated!
Thanks,
Miguel
[test-Mass-Transport-Master-Equation-PETSc-Backward-Euler][MgHx-hcp-x5x5x5-cell]
t=0.0000e+00 dt=1.0000e-07 it=( 0, 0)
0 KSP Residual norm 4.776631889125e-07
1 KSP Residual norm 6.807505564283e-17
[0]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[0]PETSC ERROR: Petsc has generated inconsistent data
[5]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[5]PETSC ERROR: Petsc has generated inconsistent data
[7]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[7]PETSC ERROR: Petsc has generated inconsistent data
[0]PETSC ERROR: MPI_Allreduce() called in different locations (code lines) on
different processors
[1]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[1]PETSC ERROR: Petsc has generated inconsistent data
[1]PETSC ERROR: MPI_Allreduce() called in different locations (code lines) on
different processors
[2]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[2]PETSC ERROR: Petsc has generated inconsistent data
[2]PETSC ERROR: MPI_Allreduce() called in different locations (code lines) on
different processors
[3]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[3]PETSC ERROR: Petsc has generated inconsistent data
[3]PETSC ERROR: MPI_Allreduce() called in different locations (code lines) on
different processors
[4]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[4]PETSC ERROR: Petsc has generated inconsistent data
[4]PETSC ERROR: MPI_Allreduce() called in different locations (code lines) on
different processors
[5]PETSC ERROR: MPI_Allreduce() called in different locations (code lines) on
different processors
[6]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[6]PETSC ERROR: Petsc has generated inconsistent data
[6]PETSC ERROR: MPI_Allreduce() called in different locations (code lines) on
different processors
[7]PETSC ERROR: MPI_Allreduce() called in different locations (code lines) on
different processors
[0]PETSC ERROR: WARNING! There are unused option(s) set! Could be the program
crashed before usage or a spelling mistake, etc!
[1]PETSC ERROR: WARNING! There are unused option(s) set! Could be the program
crashed before usage or a spelling mistake, etc!
[2]PETSC ERROR: WARNING! There are unused option(s) set! Could be the program
crashed before usage or a spelling mistake, etc!
[2]PETSC ERROR: Option left: name:-sns_monitor (no value) source: code
[2]PETSC ERROR: [3]PETSC ERROR: WARNING! There are unused option(s) set! Could
be the program crashed before usage or a spelling mistake, etc!
[3]PETSC ERROR: Option left: name:-sns_monitor (no value) source: code
[3]PETSC ERROR: See
https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!c-Z57Rxri5Jh6q1_vjqdM7SkhlAM_gLdtUB47zEkqWh4akdRiDP3bjc4UceIyWe0kH8WDSJskhzcSj3SJ2uxjA$
<https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!YCo3JjgVyVqwScfRf05FevGAOdJG2APEIkhxmpYQmmJFmnrOBYrCKeun20x6gytf7m2IpXZPhyib8zJmPUCYCw$>
for trouble shooting.
[4]PETSC ERROR: WARNING! There are unused option(s) set! Could be the program
crashed before usage or a spelling mistake, etc!
[4]PETSC ERROR: Option left: name:-sns_monitor (no value) source: code
[4]PETSC ERROR: See
https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!c-Z57Rxri5Jh6q1_vjqdM7SkhlAM_gLdtUB47zEkqWh4akdRiDP3bjc4UceIyWe0kH8WDSJskhzcSj3SJ2uxjA$
<https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!YCo3JjgVyVqwScfRf05FevGAOdJG2APEIkhxmpYQmmJFmnrOBYrCKeun20x6gytf7m2IpXZPhyib8zJmPUCYCw$>
for trouble shooting.
[5]PETSC ERROR: WARNING! There are unused option(s) set! Could be the program
crashed before usage or a spelling mistake, etc!
[5]PETSC ERROR: Option left: name:-sns_monitor (no value) source: code
[5]PETSC ERROR: See
https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!c-Z57Rxri5Jh6q1_vjqdM7SkhlAM_gLdtUB47zEkqWh4akdRiDP3bjc4UceIyWe0kH8WDSJskhzcSj3SJ2uxjA$
<https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!YCo3JjgVyVqwScfRf05FevGAOdJG2APEIkhxmpYQmmJFmnrOBYrCKeun20x6gytf7m2IpXZPhyib8zJmPUCYCw$>
for trouble shooting.
[5]PETSC ERROR: Petsc Release Version 3.21.0, unknown
[6]PETSC ERROR: WARNING! There are unused option(s) set! Could be the program
crashed before usage or a spelling mistake, etc!
[6]PETSC ERROR: Option left: name:-sns_monitor (no value) source: code
[6]PETSC ERROR: See
https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!c-Z57Rxri5Jh6q1_vjqdM7SkhlAM_gLdtUB47zEkqWh4akdRiDP3bjc4UceIyWe0kH8WDSJskhzcSj3SJ2uxjA$
<https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!YCo3JjgVyVqwScfRf05FevGAOdJG2APEIkhxmpYQmmJFmnrOBYrCKeun20x6gytf7m2IpXZPhyib8zJmPUCYCw$>
for trouble shooting.
[6]PETSC ERROR: Petsc Release Version 3.21.0, unknown
[6]PETSC ERROR: [7]PETSC ERROR: WARNING! There are unused option(s) set! Could
be the program crashed before usage or a spelling mistake, etc!
[7]PETSC ERROR: Option left: name:-sns_monitor (no value) source: code
[0]PETSC ERROR: Option left: name:-sns_monitor (no value) source: code
[0]PETSC ERROR: See
https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!c-Z57Rxri5Jh6q1_vjqdM7SkhlAM_gLdtUB47zEkqWh4akdRiDP3bjc4UceIyWe0kH8WDSJskhzcSj3SJ2uxjA$
<https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!YCo3JjgVyVqwScfRf05FevGAOdJG2APEIkhxmpYQmmJFmnrOBYrCKeun20x6gytf7m2IpXZPhyib8zJmPUCYCw$>
for trouble shooting.
[0]PETSC ERROR: Petsc Release Version 3.21.0, unknown
[0]PETSC ERROR: ./exe-tasting-SOLERA on a arch-darwin-c-debug named
mmp-laptop.local by migmolper Mon Jun 24 11:37:38 2024
[1]PETSC ERROR: Option left: name:-sns_monitor (no value) source: code
[1]PETSC ERROR: See
https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!c-Z57Rxri5Jh6q1_vjqdM7SkhlAM_gLdtUB47zEkqWh4akdRiDP3bjc4UceIyWe0kH8WDSJskhzcSj3SJ2uxjA$
<https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!YCo3JjgVyVqwScfRf05FevGAOdJG2APEIkhxmpYQmmJFmnrOBYrCKeun20x6gytf7m2IpXZPhyib8zJmPUCYCw$>
for trouble shooting.
See
https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!c-Z57Rxri5Jh6q1_vjqdM7SkhlAM_gLdtUB47zEkqWh4akdRiDP3bjc4UceIyWe0kH8WDSJskhzcSj3SJ2uxjA$
<https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!YCo3JjgVyVqwScfRf05FevGAOdJG2APEIkhxmpYQmmJFmnrOBYrCKeun20x6gytf7m2IpXZPhyib8zJmPUCYCw$>
for trouble shooting.
[2]PETSC ERROR: Petsc Release Version 3.21.0, unknown
[2]PETSC ERROR: ./exe-tasting-SOLERA on a arch-darwin-c-debug named
mmp-laptop.local by migmolper Mon Jun 24 11:37:38 2024
[2]PETSC ERROR: Configure options --download-hdf5=1 --download-mpich=1
--with-debugging=1 CC=gcc CXX=c++ PETSC_ARCH=arch-darwin-c-debug --with-x
[3]PETSC ERROR: Petsc Release Version 3.21.0, unknown
[3]PETSC ERROR: ./exe-tasting-SOLERA on a arch-darwin-c-debug named
mmp-laptop.local by migmolper Mon Jun 24 11:37:38 2024
[3]PETSC ERROR: Configure options --download-hdf5=1 --download-mpich=1
--with-debugging=1 CC=gcc CXX=c++ PETSC_ARCH=arch-darwin-c-debug --with-x
[4]PETSC ERROR: Petsc Release Version 3.21.0, unknown
[4]PETSC ERROR: ./exe-tasting-SOLERA on a arch-darwin-c-debug named
mmp-laptop.local by migmolper Mon Jun 24 11:37:38 2024
[4]PETSC ERROR: Configure options --download-hdf5=1 --download-mpich=1
--with-debugging=1 CC=gcc CXX=c++ PETSC_ARCH=arch-darwin-c-debug --with-x
[5]PETSC ERROR: ./exe-tasting-SOLERA on a arch-darwin-c-debug named
mmp-laptop.local by migmolper Mon Jun 24 11:37:38 2024
[5]PETSC ERROR: Configure options --download-hdf5=1 --download-mpich=1
--with-debugging=1 CC=gcc CXX=c++ PETSC_ARCH=arch-darwin-c-debug --with-x
./exe-tasting-SOLERA on a arch-darwin-c-debug named mmp-laptop.local by
migmolper Mon Jun 24 11:37:38 2024
[6]PETSC ERROR: Configure options --download-hdf5=1 --download-mpich=1
--with-debugging=1 CC=gcc CXX=c++ PETSC_ARCH=arch-darwin-c-debug --with-x
See
https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!c-Z57Rxri5Jh6q1_vjqdM7SkhlAM_gLdtUB47zEkqWh4akdRiDP3bjc4UceIyWe0kH8WDSJskhzcSj3SJ2uxjA$
<https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!YCo3JjgVyVqwScfRf05FevGAOdJG2APEIkhxmpYQmmJFmnrOBYrCKeun20x6gytf7m2IpXZPhyib8zJmPUCYCw$>
for trouble shooting.
[7]PETSC ERROR: Petsc Release Version 3.21.0, unknown
[7]PETSC ERROR: ./exe-tasting-SOLERA on a arch-darwin-c-debug named
mmp-laptop.local by migmolper Mon Jun 24 11:37:38 2024
[7]PETSC ERROR: Configure options --download-hdf5=1 --download-mpich=1
--with-debugging=1 CC=gcc CXX=c++ PETSC_ARCH=arch-darwin-c-debug --with-x
Configure options --download-hdf5=1 --download-mpich=1 --with-debugging=1
CC=gcc CXX=c++ PETSC_ARCH=arch-darwin-c-debug --with-x
[1]PETSC ERROR: Petsc Release Version 3.21.0, unknown
[1]PETSC ERROR: ./exe-tasting-SOLERA on a arch-darwin-c-debug named
mmp-laptop.local by migmolper Mon Jun 24 11:37:38 2024
[1]PETSC ERROR: Configure options --download-hdf5=1 --download-mpich=1
--with-debugging=1 CC=gcc CXX=c++ PETSC_ARCH=arch-darwin-c-debug --with-x
[0]PETSC ERROR: #1 PetscSplitReductionApply() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:230
[2]PETSC ERROR: #1 PetscSplitReductionApply() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:230
[2]PETSC ERROR: [3]PETSC ERROR: #1 PetscSplitReductionApply() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:230
[3]PETSC ERROR: #2 PetscSplitReductionEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:172
[4]PETSC ERROR: #1 PetscSplitReductionApply() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:230
[4]PETSC ERROR: #2 PetscSplitReductionEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:172
[5]PETSC ERROR: #1 PetscSplitReductionApply() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:230
[5]PETSC ERROR: #2 PetscSplitReductionEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:172
[0]PETSC ERROR: #2 PetscSplitReductionEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:172
[0]PETSC ERROR: #3 VecNormEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:553
[0]PETSC ERROR: #4 SNESLineSearchApply_BT() at
/Users/migmolper/petsc/src/snes/linesearch/impls/bt/linesearchbt.c:88
[1]PETSC ERROR: #1 PetscSplitReductionApply() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:230
[1]PETSC ERROR: #2 PetscSplitReductionEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:172
[1]PETSC ERROR: #3 VecNormEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:553
#2 PetscSplitReductionEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:172
[2]PETSC ERROR: #3 VecNormEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:553
[2]PETSC ERROR: #4 SNESLineSearchApply_BT() at
/Users/migmolper/petsc/src/snes/linesearch/impls/bt/linesearchbt.c:88
[2]PETSC ERROR: [3]PETSC ERROR: #3 VecNormEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:553
[3]PETSC ERROR: #4 SNESLineSearchApply_BT() at
/Users/migmolper/petsc/src/snes/linesearch/impls/bt/linesearchbt.c:88
[3]PETSC ERROR: #5 SNESLineSearchApply() at
/Users/migmolper/petsc/src/snes/linesearch/interface/linesearch.c:645
[4]PETSC ERROR: #3 VecNormEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:553
[4]PETSC ERROR: #4 SNESLineSearchApply_BT() at
/Users/migmolper/petsc/src/snes/linesearch/impls/bt/linesearchbt.c:88
[4]PETSC ERROR: #5 SNESLineSearchApply() at
/Users/migmolper/petsc/src/snes/linesearch/interface/linesearch.c:645
[5]PETSC ERROR: #3 VecNormEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:553
[5]PETSC ERROR: #4 SNESLineSearchApply_BT() at
/Users/migmolper/petsc/src/snes/linesearch/impls/bt/linesearchbt.c:88
[5]PETSC ERROR: #5 SNESLineSearchApply() at
/Users/migmolper/petsc/src/snes/linesearch/interface/linesearch.c:645
[5]PETSC ERROR: [6]PETSC ERROR: #1 PetscSplitReductionApply() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:230
[6]PETSC ERROR: #2 PetscSplitReductionEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:172
[6]PETSC ERROR: #3 VecNormEnd() at
/Users/migmolper/petsc/src/vec/vec/utils/comb.c:553
[6]PETSC ERROR: #4 SNESLineSearchApply_BT() at
/Users/migmolper/petsc/src/snes/linesearch/impls/bt/linesearchbt.c:88
[6]PETSC ERROR: #5 SNESLineSearchApply() at
/Users/migmolper/petsc/src/snes/linesearch/interface/linesearch.c:645
[7]PETSC ERROR: #1 VecXDot_MPI_Default() at
/Users/migmolper/petsc/include/../src/vec/vec/impls/mpi/pvecimpl.h:107
[7]PETSC ERROR: #2 VecDot_MPI() at
/Users/migmolper/petsc/src/vec/vec/impls/mpi/pvec2.c:10
[7]PETSC ERROR: #3 VecDot() at
/Users/migmolper/petsc/src/vec/vec/interface/rvector.c:120
[7]PETSC ERROR: #4 SNESLineSearchApply_CP() at
/Users/migmolper/petsc/src/snes/linesearch/impls/cp/linesearchcp.c:28
[0]PETSC ERROR: #5 SNESLineSearchApply() at
/Users/migmolper/petsc/src/snes/linesearch/interface/linesearch.c:645
[0]PETSC ERROR: #6 SNESSolve_NEWTONLS() at
/Users/migmolper/petsc/src/snes/impls/ls/ls.c:234
[0]PETSC ERROR: #7 SNESSolve() at
/Users/migmolper/petsc/src/snes/interface/snes.c:4738
[0]PETSC ERROR: #8 TSTheta_SNESSolve() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:174
[1]PETSC ERROR: #4 SNESLineSearchApply_BT() at
/Users/migmolper/petsc/src/snes/linesearch/impls/bt/linesearchbt.c:88
[1]PETSC ERROR: #5 SNESLineSearchApply() at
/Users/migmolper/petsc/src/snes/linesearch/interface/linesearch.c:645
[1]PETSC ERROR: #6 SNESSolve_NEWTONLS() at
/Users/migmolper/petsc/src/snes/impls/ls/ls.c:234
[1]PETSC ERROR: #7 SNESSolve() at
/Users/migmolper/petsc/src/snes/interface/snes.c:4738
[1]PETSC ERROR: #8 TSTheta_SNESSolve() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:174
[1]PETSC ERROR: #9 TSStep_Theta() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:225
[1]PETSC ERROR: #10 TSStep() at
/Users/migmolper/petsc/src/ts/interface/ts.c:3391
[1]PETSC ERROR: #11 TSSolve() at
/Users/migmolper/petsc/src/ts/interface/ts.c:4037
#5 SNESLineSearchApply() at
/Users/migmolper/petsc/src/snes/linesearch/interface/linesearch.c:645
[2]PETSC ERROR: #6 SNESSolve_NEWTONLS() at
/Users/migmolper/petsc/src/snes/impls/ls/ls.c:234
[2]PETSC ERROR: #7 SNESSolve() at
/Users/migmolper/petsc/src/snes/interface/snes.c:4738
[2]PETSC ERROR: #8 TSTheta_SNESSolve() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:174
[2]PETSC ERROR: #9 TSStep_Theta() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:225
[2]PETSC ERROR: #10 TSStep() at
/Users/migmolper/petsc/src/ts/interface/ts.c:3391
[2]PETSC ERROR: #11 TSSolve() at
/Users/migmolper/petsc/src/ts/interface/ts.c:4037
[3]PETSC ERROR: #6 SNESSolve_NEWTONLS() at
/Users/migmolper/petsc/src/snes/impls/ls/ls.c:234
[3]PETSC ERROR: #7 SNESSolve() at
/Users/migmolper/petsc/src/snes/interface/snes.c:4738
[3]PETSC ERROR: #8 TSTheta_SNESSolve() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:174
[3]PETSC ERROR: #9 TSStep_Theta() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:225
[3]PETSC ERROR: #10 TSStep() at
/Users/migmolper/petsc/src/ts/interface/ts.c:3391
[3]PETSC ERROR: #11 TSSolve() at
/Users/migmolper/petsc/src/ts/interface/ts.c:4037
[4]PETSC ERROR: #6 SNESSolve_NEWTONLS() at
/Users/migmolper/petsc/src/snes/impls/ls/ls.c:234
[4]PETSC ERROR: #7 SNESSolve() at
/Users/migmolper/petsc/src/snes/interface/snes.c:4738
[4]PETSC ERROR: #8 TSTheta_SNESSolve() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:174
[4]PETSC ERROR: #9 TSStep_Theta() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:225
[4]PETSC ERROR: #10 TSStep() at
/Users/migmolper/petsc/src/ts/interface/ts.c:3391
[4]PETSC ERROR: #11 TSSolve() at
/Users/migmolper/petsc/src/ts/interface/ts.c:4037
#6 SNESSolve_NEWTONLS() at /Users/migmolper/petsc/src/snes/impls/ls/ls.c:234
[5]PETSC ERROR: #7 SNESSolve() at
/Users/migmolper/petsc/src/snes/interface/snes.c:4738
[5]PETSC ERROR: #8 TSTheta_SNESSolve() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:174
[5]PETSC ERROR: #9 TSStep_Theta() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:225
[5]PETSC ERROR: #10 TSStep() at
/Users/migmolper/petsc/src/ts/interface/ts.c:3391
[5]PETSC ERROR: #11 TSSolve() at
/Users/migmolper/petsc/src/ts/interface/ts.c:4037
[6]PETSC ERROR: #6 SNESSolve_NEWTONLS() at
/Users/migmolper/petsc/src/snes/impls/ls/ls.c:234
[6]PETSC ERROR: #7 SNESSolve() at
/Users/migmolper/petsc/src/snes/interface/snes.c:4738
[6]PETSC ERROR: #8 TSTheta_SNESSolve() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:174
[6]PETSC ERROR: #9 TSStep_Theta() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:225
[6]PETSC ERROR: #10 TSStep() at
/Users/migmolper/petsc/src/ts/interface/ts.c:3391
[6]PETSC ERROR: #11 TSSolve() at
/Users/migmolper/petsc/src/ts/interface/ts.c:4037
[7]PETSC ERROR: #5 SNESLineSearchApply() at
/Users/migmolper/petsc/src/snes/linesearch/interface/linesearch.c:645
[7]PETSC ERROR: #6 SNESSolve_NEWTONLS() at
/Users/migmolper/petsc/src/snes/impls/ls/ls.c:234
[7]PETSC ERROR: #7 SNESSolve() at
/Users/migmolper/petsc/src/snes/interface/snes.c:4738
[7]PETSC ERROR: #8 TSTheta_SNESSolve() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:174
[7]PETSC ERROR: #9 TSStep_Theta() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:225
[7]PETSC ERROR: #10 TSStep() at
/Users/migmolper/petsc/src/ts/interface/ts.c:3391
[7]PETSC ERROR: #11 TSSolve() at
/Users/migmolper/petsc/src/ts/interface/ts.c:4037
[0]PETSC ERROR: #9 TSStep_Theta() at
/Users/migmolper/petsc/src/ts/impls/implicit/theta/theta.c:225
[0]PETSC ERROR: #10 TSStep() at
/Users/migmolper/petsc/src/ts/interface/ts.c:3391
[0]PETSC ERROR: #11 TSSolve() at
/Users/migmolper/petsc/src/ts/interface/ts.c:4037
[0]PETSC ERROR: #12 Mass_Transport_Master_Equation_PETSc() at
/Users/migmolper/DMD/SOLERA/Chemical-eqs/Mass-Transport-PETSc.cpp:251
[2]PETSC ERROR: #12 Mass_Transport_Master_Equation_PETSc() at
/Users/migmolper/DMD/SOLERA/Chemical-eqs/Mass-Transport-PETSc.cpp:251
[3]PETSC ERROR: #12 Mass_Transport_Master_Equation_PETSc() at
/Users/migmolper/DMD/SOLERA/Chemical-eqs/Mass-Transport-PETSc.cpp:251
[1]PETSC ERROR: #12 Mass_Transport_Master_Equation_PETSc() at
/Users/migmolper/DMD/SOLERA/Chemical-eqs/Mass-Transport-PETSc.cpp:251
[4]PETSC ERROR: #12 Mass_Transport_Master_Equation_PETSc() at
/Users/migmolper/DMD/SOLERA/Chemical-eqs/Mass-Transport-PETSc.cpp:251
[5]PETSC ERROR: #12 Mass_Transport_Master_Equation_PETSc() at
/Users/migmolper/DMD/SOLERA/Chemical-eqs/Mass-Transport-PETSc.cpp:251
[6]PETSC ERROR: #12 Mass_Transport_Master_Equation_PETSc() at
/Users/migmolper/DMD/SOLERA/Chemical-eqs/Mass-Transport-PETSc.cpp:251
[7]PETSC ERROR: #12 Mass_Transport_Master_Equation_PETSc() at
/Users/migmolper/DMD/SOLERA/Chemical-eqs/Mass-Transport-PETSc.cpp:251
