Hello
I've a filter which defines a chromosomal region, thus in the marteditor
it has no field, tableConstraint, nor key but a filterList with
appropriate filter list (chr,start,end).
It works fine when I use Web interface of BioMart.
However, I need to retrieve the value of this filter in a homemade
Formatter.
I can retrieve values of all other filters (except this one) using this
script in the getDisplayNames subroutine of the formatter :
foreach my $f (@{$query->getAllFilters}) {
foreach my $row (@{$f->getTable->getRows}){
printf STDERR "filter name: %s value= %s\n",$f->name,$row->[0];
}
}
Why doesn't it work for this special kind of filter ?
thanks
Patrice
--
Patrice Dehais : INRA - LCG - SIGENAE,
Chemin de Borde-Rouge - Auzeville - BP 52627
31326 Castanet-Tolosan cedex - FRANCE
tel: +33(0)5.61.28.57.08 fax: +33(0)5.61.28.53.08
http://www.sigenae.org
