Pointer Attributes! solved the problem.

Thanks for your help,

-Kiran


On Wed, 2010-11-10 at 13:51 +0000, Syed Haider wrote:
> Hi Kiran,
> 
> Attribtues from multiple AttributePages are not allowed to be queried 
> together. However, you can move (create a pointer) to the attribute that 
> you need from the offending page and leave them with other das 
> attributes within the same page.
> 
> Hope this helps,
> Syed
> 
> On 10/11/2010 21:09, Kiran Mukhyala wrote:
> > I am getting the error: "Attributes from multiple attribute pages are
> > not allowed" when trying to use the built-in DAS server of BioMart 0.7.
> >
> > My local mart is configured similar to Ensembl mart and so the filters
> > and attributes for the importable/exportable pairs ensembl_das_chr and
> > ensembl_das_gene are identical to Ensembl.
> >
> > das_gene request works:
> > myserver/biomart/das/default__hsapiens_gene_ensembl__ensembl_das_gene/features?segment=....
> >
> > but das_chr request
> > (myserver/biomart/das/default__hsapiens_gene_ensembl__ensembl_das_chr/features?segment=....)
> >
> > doesn't work, and shows this error:
> > "Attributes from multiple attribute pages are not allowed"
> >
> > The attributes listed in the ensembl_das_chr exportable are:
> > ensembl_gene_id,start_position,end_position,strand,ensembl_transcript_id,transcript_start,transcript_end,ensembl_exon_id,exon_chrom_start,exon_chrom_end
> >
> > which does include attributes from multiple pages. If the I remove the
> > attributes from the structure page, I don't get an error.
> >
> > I did see the post
> > (http://www.mail-archive.com/[email protected]/msg02381.html) saying
> > this feature (supporting exportable with attributes from multiple pages)
> > is not supported in BioMart 0.7.
> >
> > How did Ensembl get around this? See :
> > http://www.biomart.org/biomart/das/default__hsapiens_gene_ensembl__ensembl_das_chr/features?segment=13:31787617,31871805
> >
> > Thanks,
> >
> > -Kiran
> >
> >
> >
> >
> >
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> >

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