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https://jira.codehaus.org/browse/MCHECKSTYLE-70?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=353087#comment-353087
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Robert Scholte commented on MCHECKSTYLE-70:
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[~arlol], you probably already guessed the answer: since these are
compileSourceRoots, they are included as well. Maven doesn't distinguish
generated sourceroots from real sourceroots, you can hope that the generated
end up in the target-directory. Up until 2.12 you could only specify 1 source
directory, now you can have more and specify if you want.
I'd love to implement MCHECKSTYLE-187, which would solve this issue as well,
but that will have a huge impact.
> Support for multiple source folders
> -----------------------------------
>
> Key: MCHECKSTYLE-70
> URL: https://jira.codehaus.org/browse/MCHECKSTYLE-70
> Project: Maven Checkstyle Plugin
> Issue Type: Improvement
> Affects Versions: 2.1
> Reporter: Jan Palmquist
> Assignee: Robert Scholte
> Priority: Minor
> Fix For: 2.13
>
>
> It would be great if this plugin would support multiple source folders added
> by http://mojo.codehaus.org/build-helper-maven-plugin/ (or similar), and by
> default inspect sources from these folders instead of just
> $\{project.build.sourceDirectory}. Correspondingly with respect to test
> sources if those are configured to be included.
> There are other plugins available solving this problem (somehow), eg:
> * http://mojo.codehaus.org/jdepend-maven-plugin/
> * http://mojo.codehaus.org/findbugs-maven-plugin/
> Maybe they can give some inspiration for how to make this possible?
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