danielballan opened a new issue, #2066:
URL: https://github.com/apache/arrow-adbc/issues/2066
### What would you like help with?
Hello @paleolimbot, we briefly spoke at SciPy a month ago. @cpcloud and
@gforsyth sent me your way.
My colleauge @skarakuzu and I have the following application:
```
Science Experiment ---> ~10Hz rows of data over HTTP ---> Database
```
In our use case, we are interested in reading partial datasets while an
experiment is still ongoing, but we are not especially sensitive to real-time
access; a little lag is acceptable. We would like to use Postgres for
facility-scale "production" and SQLite for small deployments and dev/test.
We think it makes sense to use ADBC to get the data into Postgres and SQLite.
Most of our data is simple tabular data with basic types. This is a simple
sketch that works:
```python
import os
import pandas
import pyarrow
import adbc_driver_postgresql.dbapi
import adbc_driver_sqlite.dbapi
conn = adbc_driver_sqlite.dbapi.connect("test.sqlite")
with conn.cursor() as cur:
cur.execute("DROP TABLE IF EXISTS example")
dfs = [
pandas.DataFrame({"A": [1, 2, 3], "B": [10., 20., 30.]}),
pandas.DataFrame({"A": [4, 5, 6], "B": [40., 50., 60.]}),
]
# Create a table and append to it.
with conn.cursor() as cur:
for df in dfs:
table = pyarrow.Table.from_pandas(df)
cur.adbc_ingest("example", table, mode="create_append")
cur.execute("SELECT * FROM example")
print(cur.fetchall())
conn.close()
```
In rare cases, we have detectors that produce a small "waveform" of data, a
small variable-length list, alongisde some readings, like this:
```python
dfs = [
pandas.DataFrame({"A": [[1, 2, 3], [1, 2], [1, 2, 3, 4]], "B": [10.,
20., 30.]}),
pandas.DataFrame({"A": [[4, 5, 6], [4, 5, 6, 7], [4]], "B": [40., 50.,
60.]}),
]
```
Expand for a complete runnable example with this data:
<details>
```python
import os
import pandas
import pyarrow
import adbc_driver_postgresql.dbapi
import adbc_driver_sqlite.dbapi
conn = adbc_driver_sqlite.dbapi.connect("test.sqlite")
with conn.cursor() as cur:
cur.execute("DROP TABLE IF EXISTS example")
dfs = [
pandas.DataFrame({"A": [[1, 2, 3], [1, 2], [1, 2, 3, 4]], "B": [10.,
20., 30.]}),
pandas.DataFrame({"A": [[4, 5, 6], [4, 5, 6, 7], [4]], "B": [40., 50.,
60.]}),
]
# Create a table and append to it.
with conn.cursor() as cur:
for df in dfs:
table = pyarrow.Table.from_pandas(df)
cur.adbc_ingest("example", table, mode="create_append")
cur.execute("SELECT * FROM example")
print(cur.fetchall())
conn.close()
```
</details>
As you would expect this fails with a clear error message:
```
adbc_driver_manager.NotSupportedError: NOT_IMPLEMENTED: Column 0 has
unsupported type list
```
It looks like support for lists was recently added for Postgres in
https://github.com/apache/arrow-adbc/pull/1962 but not yet released. We have
tried without success to cobble together a C++ example inserting lists into
PostgreSQL on `main`. I wonder if you could sketch a short runnable example to
help us get started. (Let us know if you want to see what we've tried.) We
would happy to contribute to the C++ documentation for ADBC once get something
working.
Once #1962 is released, should we expect lists to work from Python as well,
as it wraps the C/C++, or are more changes needed on the Python side to make
that work?
Finally, we're interested in adding support for lists in SQLite. As SQLite
is loose about types, perhaps one reasonable way to do this would be with a
JSON column. I wonder what you think of that approach.
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