commit: 5fd2d15989cb1eb99579c0679c16772620be122f
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue Feb 24 22:37:13 2015 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue Feb 24 22:37:13 2015 +0000
URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=5fd2d159
version bump; still missing src_compile() logic
Package-Manager: portage-2.2.15
---
sci-biology/fastqc/ChangeLog | 8 +++++++-
sci-biology/fastqc/{fastqc-0.10.1.ebuild => fastqc-0.11.2.ebuild} | 7 ++++---
2 files changed, 11 insertions(+), 4 deletions(-)
diff --git a/sci-biology/fastqc/ChangeLog b/sci-biology/fastqc/ChangeLog
index 42bae79..6b6cbf5 100644
--- a/sci-biology/fastqc/ChangeLog
+++ b/sci-biology/fastqc/ChangeLog
@@ -1,7 +1,13 @@
# ChangeLog for sci-biology/fastqc
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*fastqc-0.11.2 (24 Feb 2015)
+
+ 24 Feb 2015; Martin Mokrejs <[email protected]>
+ +fastqc-0.11.2.ebuild, -fastqc-0.10.1.ebuild:
+ version bump; still missing src_compile() logic
+
16 Sep 2014; Christoph Junghans <[email protected]> fastqc-0.10.1.ebuild:
clean up
diff --git a/sci-biology/fastqc/fastqc-0.10.1.ebuild
b/sci-biology/fastqc/fastqc-0.11.2.ebuild
similarity index 85%
rename from sci-biology/fastqc/fastqc-0.10.1.ebuild
rename to sci-biology/fastqc/fastqc-0.11.2.ebuild
index 3e2b639..b608266 100644
--- a/sci-biology/fastqc/fastqc-0.10.1.ebuild
+++ b/sci-biology/fastqc/fastqc-0.11.2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
@@ -16,13 +16,14 @@ KEYWORDS=""
IUSE=""
DEPEND="sci-biology/picard
- >=virtual/jrei-1.6"
+ >=virtual/jre-1.5"
RDEPEND="${DEPEND}"
S="${WORKDIR}"/FastQC
src_install(){
- dobin fastqc
+ dobin fastqc run_fastqc.bat
+ dodoc README.txt RELEASE_NOTES.txt
# TODO: need to compile java in uk/ac/babraham/FastQC/
# and decide whether jbzip2-0.9.jar is a standard java lib or not
