commit: b46449a0730b60d7e4e4bdb30deeaac07a8929f5
Author: Andrei Zavada <johnhommer <AT> gmail <DOT> com>
AuthorDate: Thu Feb 19 13:18:17 2015 +0000
Commit: Christoph Junghans <ottxor <AT> gentoo <DOT> org>
CommitDate: Thu Feb 19 13:18:17 2015 +0000
URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=b46449a0
Merge branch 'master' of github.com:gentoo-science/sci
# Conflicts:
# sci-biology/aghermann/ChangeLog
# sci-biology/aghermann/aghermann-1.0.3.ebuild
.travis.yml | 29 ++---
app-forensics/vine/ChangeLog | 5 +-
app-forensics/vine/metadata.xml | 8 +-
app-forensics/vine/vine-1.0.ebuild | 3 +-
dev-cpp/eigen/ChangeLog | 6 +-
dev-cpp/eigen/Manifest | 2 -
dev-cpp/eigen/eigen-3.2.0-r1.ebuild | 102 -----------------
dev-cpp/eigen/eigen-9999.ebuild | 4 +-
dev-cpp/eigen/metadata.xml | 18 +--
dev-java/hdf-java/ChangeLog | 6 +-
dev-java/hdf-java/hdf-java-2.9.ebuild | 4 +-
dev-java/hdf-java/metadata.xml | 12 +-
dev-lang/conceptual/ChangeLog | 6 +-
dev-lang/conceptual/conceptual-1.4.ebuild | 8 +-
dev-lang/conceptual/metadata.xml | 14 +--
dev-lang/path64/ChangeLog | 6 +-
dev-lang/path64/path64-9999.ebuild | 5 +-
dev-lua/cmsgpack/ChangeLog | 5 +-
dev-lua/cmsgpack/cmsgpack-0.3.0.ebuild | 49 +--------
dev-lua/cmsgpack/cmsgpack-9999.ebuild | 30 ++---
dev-ml/mlgmpidl/ChangeLog | 7 +-
dev-ml/mlgmpidl/metadata.xml | 10 +-
dev-ml/mlgmpidl/mlgmpidl-1.1.ebuild | 50 ++++-----
dev-ml/zarith/ChangeLog | 6 +-
dev-ml/zarith/metadata.xml | 10 +-
dev-ml/zarith/zarith-1.2.1.ebuild | 27 +++--
dev-python/omniorbpy/ChangeLog | 6 +-
dev-python/omniorbpy/omniorbpy-3.4.ebuild | 12 +-
dev-python/pythonocc/ChangeLog | 6 +-
dev-python/pythonocc/pythonocc-0.5.ebuild | 6 +-
dev-util/amdapp/ChangeLog | 4 +
dev-util/amdapp/Manifest | 2 -
dev-util/amdapp/amdapp-2.8.ebuild | 89 ---------------
dev-util/amdapp/amdapp-2.9.ebuild | 12 +-
dev-util/amdapp/metadata.xml | 4 +-
dev-util/numdiff/ChangeLog | 6 +-
dev-util/numdiff/metadata.xml | 12 +-
dev-util/numdiff/numdiff-5.8.1.ebuild | 11 +-
dev-util/nvidia-cuda-toolkit/ChangeLog | 6 +
...ebuild => nvidia-cuda-toolkit-7.0.18-r1.ebuild} | 2 +
eclass/emboss-r1.eclass | 2 +-
net-ftp/bbftp-client/ChangeLog | 6 +-
net-ftp/bbftp-client/bbftp-client-3.2.1.ebuild | 6 +-
net-ftp/bbftp-server/ChangeLog | 6 +-
net-ftp/bbftp-server/bbftp-server-3.2.1.ebuild | 6 +-
profiles/categories | 121 +--------------------
sci-astronomy/astrometry/ChangeLog | 6 +-
sci-astronomy/astrometry/astrometry-0.43.ebuild | 22 ++--
sci-astronomy/astrometry/metadata.xml | 10 +-
sci-astronomy/stiff/ChangeLog | 5 +-
sci-astronomy/stiff/metadata.xml | 4 +-
sci-astronomy/stiff/stiff-9999.ebuild | 4 +-
sci-biology/Atlas2/Atlas2-1.4.3.ebuild | 4 +-
sci-biology/Atlas2/ChangeLog | 6 +-
sci-biology/Atlas_GapFill/Atlas_GapFill-2.2.ebuild | 9 +-
sci-biology/Atlas_GapFill/ChangeLog | 4 +-
sci-biology/BBmap/BBmap-31.40.ebuild | 6 +-
sci-biology/BBmap/ChangeLog | 5 +-
sci-biology/BG7/BG7-9999.ebuild | 6 +-
sci-biology/BG7/ChangeLog | 6 +-
sci-biology/BamView/BamView-1.2.11.ebuild | 7 +-
sci-biology/BamView/ChangeLog | 6 +-
sci-biology/BamView/metadata.xml | 8 +-
sci-biology/MagicViewer/ChangeLog | 6 +-
sci-biology/MagicViewer/MagicViewer-1.2.1.ebuild | 12 +-
sci-biology/MagicViewer/metadata.xml | 10 +-
sci-biology/VarScan/ChangeLog | 6 +-
sci-biology/VarScan/VarScan-2.3.6.ebuild | 9 +-
sci-biology/VarScan/metadata.xml | 2 +-
sci-biology/ampliconnoise/ChangeLog | 4 +-
.../ampliconnoise/ampliconnoise-1.27.ebuild | 7 +-
sci-biology/apollo/ChangeLog | 5 +-
sci-biology/apollo/apollo-9999.ebuild | 19 ++--
sci-biology/apollo/metadata.xml | 10 +-
sci-biology/artemis/ChangeLog | 5 +-
sci-biology/artemis/artemis-9999.ebuild | 12 +-
sci-biology/biopieces/ChangeLog | 5 +-
sci-biology/biopieces/Manifest | 1 -
sci-biology/biopieces/biopieces-0.51.ebuild | 64 +----------
sci-biology/biopieces/biopieces-9999.ebuild | 49 +++++----
sci-biology/cgview-bin/ChangeLog | 5 +-
sci-biology/cgview-bin/cgview-bin-20131130.ebuild | 34 +++---
sci-biology/discrover/ChangeLog | 4 +
sci-biology/discrover/discrover-1.5.2.ebuild | 28 +++--
sci-biology/discrover/discrover-9999.ebuild | 29 +++--
sci-biology/discrover/metadata.xml | 24 ++--
sci-biology/igv/ChangeLog | 6 +-
sci-biology/igv/igv-2.0.32.ebuild | 35 ------
sci-biology/igv/igv-2.0.35.ebuild | 20 ++--
sci-biology/igv/metadata.xml | 10 +-
sci-biology/jtreeview/ChangeLog | 6 +
sci-biology/jtreeview/jtreeview-1.1.6.4.ebuild | 9 +-
sci-biology/mrbayes/ChangeLog | 6 +-
sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild | 4 +-
sci-biology/ncbi-blast+/ChangeLog | 3 +
sci-biology/ncbi-blast+/ncbi-blast+-2.2.30.ebuild | 16 ++-
sci-biology/ncbi-tools++/ChangeLog | 5 +-
.../ncbi-tools++/ncbi-tools++-12.0.0.ebuild | 18 +--
sci-biology/ngsview/ChangeLog | 5 +-
sci-biology/ngsview/ngsview-0.91.ebuild | 23 ++--
sci-biology/psychopy/ChangeLog | 7 +-
sci-biology/psychopy/Manifest | 2 -
sci-biology/psychopy/psychopy-1.75.01.ebuild | 56 ----------
sci-biology/psychopy/psychopy-1.77.02.ebuild | 56 ----------
sci-biology/psychopy/psychopy-1.78.00.ebuild | 4 +-
sci-biology/psychopy/psychopy-9999.ebuild | 4 +-
sci-biology/tablet/ChangeLog | 4 +
sci-biology/tablet/tablet-1.13.12.17.ebuild | 51 ---------
sci-biology/tablet/tablet-1.14.04.10.ebuild | 52 +--------
sci-biology/tablet/tablet-9999.ebuild | 28 ++---
sci-biology/trimmomatic/ChangeLog | 3 +
sci-biology/trimmomatic/trimmomatic-0.32.ebuild | 14 +--
sci-biology/vague-bin/ChangeLog | 3 +
sci-biology/vague-bin/vague-bin-1.0.5.ebuild | 9 +-
sci-libs/clfft/ChangeLog | 5 +
sci-libs/clfft/Manifest | 1 +
.../clfft/{clfft-2.2.ebuild => clfft-2.4.ebuild} | 0
sci-libs/libspatialindex/ChangeLog | 7 +-
.../libspatialindex/libspatialindex-1.8.5.ebuild | 27 ++---
sci-libs/libspatialindex/metadata.xml | 10 +-
sci-visualization/mantid/ChangeLog | 7 ++
sci-visualization/mantid/mantid-3.3.0.ebuild | 56 ++++++----
sci-visualization/mantid/metadata.xml | 28 ++---
sci-visualization/mayavi/ChangeLog | 4 +
sci-visualization/mayavi/mayavi-4.4.0.ebuild | 6 +-
sci-visualization/mayavi/metadata.xml | 4 +-
sys-apps/hwloc/ChangeLog | 10 ++
sys-apps/hwloc/hwloc-1.10.1.ebuild | 6 +-
sys-apps/hwloc/metadata.xml | 20 ++--
sys-cluster/htcondor/ChangeLog | 4 +
sys-cluster/htcondor/htcondor-8.0.0.ebuild | 22 ++--
sys-cluster/htcondor/htcondor-8.3.2.ebuild | 19 ++--
sys-cluster/lustre/ChangeLog | 5 +-
sys-cluster/lustre/lustre-9999.ebuild | 4 +-
sys-cluster/mvapich2/ChangeLog | 5 +-
sys-cluster/mvapich2/mvapich2-1.6-r1.ebuild | 8 +-
sys-cluster/openmpi/ChangeLog | 5 +
sys-cluster/openmpi/metadata.xml | 24 ++--
sys-cluster/openmpi/openmpi-1.6.5.ebuild | 10 +-
sys-cluster/openmpi/openmpi-1.7.3.ebuild | 8 +-
sys-cluster/openmpi/openmpi-1.8.1.ebuild | 8 +-
sys-cluster/openmpi/openmpi-1.8.3.ebuild | 8 +-
sys-cluster/openmpi/openmpi-1.8.4-r2.ebuild | 6 +-
143 files changed, 774 insertions(+), 1237 deletions(-)
