commit:     daddde5e9f55ebf842ffc35660de9007810ffb39
Author:     Arthur Zamarin <arthurzam <AT> gentoo <DOT> org>
AuthorDate: Wed Jun 12 06:15:53 2024 +0000
Commit:     Arthur Zamarin <arthurzam <AT> gentoo <DOT> org>
CommitDate: Wed Jun 12 06:15:53 2024 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=daddde5e

sci-libs/libghemical: treeclean

Closes: https://bugs.gentoo.org/931860
Bug: https://bugs.gentoo.org/891895
Bug: https://bugs.gentoo.org/850739
Bug: https://bugs.gentoo.org/831798
Bug: https://bugs.gentoo.org/514352
Bug: https://bugs.gentoo.org/466112
Signed-off-by: Arthur Zamarin <arthurzam <AT> gentoo.org>

 profiles/package.mask                              |  5 ---
 sci-libs/libghemical/Manifest                      |  1 -
 .../libghemical/files/libghemical-2.98-gl.patch    | 13 -------
 sci-libs/libghemical/libghemical-3.0.0.ebuild      | 40 ----------------------
 sci-libs/libghemical/metadata.xml                  | 21 ------------
 5 files changed, 80 deletions(-)

diff --git a/profiles/package.mask b/profiles/package.mask
index d4944197d708..f122911533a2 100644
--- a/profiles/package.mask
+++ b/profiles/package.mask
@@ -446,11 +446,6 @@ media-gfx/raw-thumbnailer
 # Removal: 2024-06-12.  Bug #931861.
 sci-libs/cifparse-obj
 
-# Arthur Zamarin <[email protected]> (2024-05-13)
-# EAPI=6, fails to compile, no reverse dependencies.
-# Removal: 2024-06-12.  Bugs #931860, #891895.
-sci-libs/libghemical
-
 # Sam James <[email protected]> (2024-04-28)
 # Masked for testing. Tracker bug: bug #930805.
 >=sys-libs/ncurses-6.5

diff --git a/sci-libs/libghemical/Manifest b/sci-libs/libghemical/Manifest
deleted file mode 100644
index cd9d8ff520a5..000000000000
--- a/sci-libs/libghemical/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST libghemical-3.0.0.tar.gz 787947 BLAKE2B 
ea0bf4c8f257df3d22d5efdede83cea1ad2239692e98c87cdb44c7da3352956d5bc21c2c92f6ab8759cf6b8cad2d6041cb49d4532234ba8ff2d323db583c7d48
 SHA512 
71531e7bd72a7fa063dd35536a346f15e3c0fd0284112fa2f304580204b93552bd0c9a426cee22044b5dd1662e34e5d191d20af938e474561fe55f2394e7519e

diff --git a/sci-libs/libghemical/files/libghemical-2.98-gl.patch 
b/sci-libs/libghemical/files/libghemical-2.98-gl.patch
deleted file mode 100644
index 8cea8aab636e..000000000000
--- a/sci-libs/libghemical/files/libghemical-2.98-gl.patch
+++ /dev/null
@@ -1,13 +0,0 @@
-diff --git a/src/typedef.h b/src/typedef.h
-index 8d2efcc..1e304e8 100644
---- a/src/typedef.h
-+++ b/src/typedef.h
-@@ -27,7 +27,7 @@
- 
- // comment this out if you have no GL/gl.h available...
- 
--#define HAVE_GL_H     // 2008-07-31 ; also with mingw comment this out???
-+// #define HAVE_GL_H  // 2008-07-31 ; also with mingw comment this out??? 
- 
- // added by Robert Williams for Compaq cxx, alpha 11/28/01
- 

diff --git a/sci-libs/libghemical/libghemical-3.0.0.ebuild 
b/sci-libs/libghemical/libghemical-3.0.0.ebuild
deleted file mode 100644
index de7e0299a0dc..000000000000
--- a/sci-libs/libghemical/libghemical-3.0.0.ebuild
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 1999-2018 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit autotools
-
-DESCRIPTION="Chemical quantum mechanics and molecular mechanics"
-HOMEPAGE="http://bioinformatics.org/ghemical/";
-SRC_URI="http://www.bioinformatics.org/ghemical/download/current/${P}.tar.gz";
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~ppc ~x86"
-IUSE="mopac7 mpqc static-libs"
-
-RDEPEND="
-       mopac7? ( >=sci-chemistry/mopac7-1.13-r1 )
-       mpqc? (
-               >=sci-chemistry/mpqc-2.3.1-r1
-               virtual/blas
-               virtual/lapack
-       )"
-DEPEND="${RDEPEND}
-       virtual/pkgconfig"
-
-PATCHES=( "${FILESDIR}"/${PN}-2.98-gl.patch )
-
-src_prepare() {
-       default
-       eautoreconf
-}
-
-src_configure() {
-       econf \
-               --enable-shared \
-               $(use_enable mopac7) \
-               $(use_enable mpqc) \
-               $(use_enable static-libs static)
-}

diff --git a/sci-libs/libghemical/metadata.xml 
b/sci-libs/libghemical/metadata.xml
deleted file mode 100644
index d7bc678f012b..000000000000
--- a/sci-libs/libghemical/metadata.xml
+++ /dev/null
@@ -1,21 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd";>
-<pkgmetadata>
-  <maintainer type="project">
-    <email>[email protected]</email>
-    <name>Gentoo Chemistry Project</name>
-  </maintainer>
-  <longdescription>
-  Ghemical supports both quantum-mechanics (semi-empirical and ab initio) 
models
-  and molecular mechanics models (there is an experimental Tripos 5.2-like 
force
-  field for organic molecules). Also a tool for reduced protein models is
-  included. Geometry optimization, molecular dynamics and a large set of
-  visualization tools are currently available.
-  </longdescription>
-  <use>
-    <flag name="mopac7">Use <pkg>sci-chemistry/mopac7</pkg> for semi-empirical
-    calculations</flag>
-    <flag name="mpqc">Use <pkg>sci-chemistry/mpqc</pkg> for quantum-mechanical
-    calculations</flag>
-  </use>
-</pkgmetadata>

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