commit: 40119f3fb7d6b6327d75d40be30a5cbc2b9dc6e4 Author: Brahmajit Das <brahmajit.xyz <AT> gmail <DOT> com> AuthorDate: Sat Jun 17 06:22:09 2023 +0000 Commit: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org> CommitDate: Mon Sep 11 07:37:27 2023 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=40119f3f
sci-biology/pilercr: Fix error: ISO C++17 does not allow register storage class specifier Closes: https://bugs.gentoo.org/898124 Signed-off-by: Brahmajit Das <brahmajit.xyz <AT> gmail.com> Closes: https://github.com/gentoo/gentoo/pull/31498 Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org> .../pilercr/files/pilercr-1.0-drop-registers.patch | 14 +++++++++++ sci-biology/pilercr/pilercr-1.0-r3.ebuild | 29 ++++++++++++++++++++++ 2 files changed, 43 insertions(+) diff --git a/sci-biology/pilercr/files/pilercr-1.0-drop-registers.patch b/sci-biology/pilercr/files/pilercr-1.0-drop-registers.patch new file mode 100644 index 000000000000..ab1535b4a767 --- /dev/null +++ b/sci-biology/pilercr/files/pilercr-1.0-drop-registers.patch @@ -0,0 +1,14 @@ +--- a/comp.cpp ++++ b/comp.cpp +@@ -28,7 +28,7 @@ void Complement(char *seq, int len) + /* Complement and reverse sequence */ + + +- { register unsigned char *s, *t; ++ { unsigned char *s, *t; + int c; + + +old mode 100644 +new mode 100755 +Binary files a/pilercr and b/pilercr differ diff --git a/sci-biology/pilercr/pilercr-1.0-r3.ebuild b/sci-biology/pilercr/pilercr-1.0-r3.ebuild new file mode 100644 index 000000000000..5e73cddf5a10 --- /dev/null +++ b/sci-biology/pilercr/pilercr-1.0-r3.ebuild @@ -0,0 +1,29 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit toolchain-funcs + +DESCRIPTION="Analysis of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPRs)" +HOMEPAGE="http://www.drive5.com/pilercr/"; +SRC_URI="http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> ${P}.tar.gz" +S="${WORKDIR}" + +LICENSE="public-domain" +SLOT="0" +KEYWORDS="~amd64 ~x86" + +PATCHES=( + "${FILESDIR}"/${PN}-1.0-fix-build-system.patch + "${FILESDIR}"/${PN}-1.0-gcc43.patch + "${FILESDIR}"/${PN}-1.0-drop-registers.patch +) + +src_configure() { + tc-export CXX +} + +src_install() { + dobin pilercr +}
