commit: 4d36e47773d01a0d4d91d2eee5d2701dcdebe9d0 Author: Horea Christian <chr <AT> chymera <DOT> eu> AuthorDate: Thu Sep 15 07:03:40 2022 +0000 Commit: Horea Christian <horea.christ <AT> gmail <DOT> com> CommitDate: Thu Sep 15 07:03:40 2022 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=4d36e477
sci-biology/ants: add 2.3.4 Signed-off-by: Horea Christian <chr <AT> chymera.eu> sci-biology/ants/ants-2.3.4.ebuild | 78 ++++++++++++++++++++++++++++++++++++++ 1 file changed, 78 insertions(+) diff --git a/sci-biology/ants/ants-2.3.4.ebuild b/sci-biology/ants/ants-2.3.4.ebuild new file mode 100644 index 000000000..95eb6355b --- /dev/null +++ b/sci-biology/ants/ants-2.3.4.ebuild @@ -0,0 +1,78 @@ +# Copyright 1999-2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +CMAKE_MAKEFILE_GENERATOR="emake" + +inherit cmake + +MY_PN="ANTs" + +DESCRIPTION="Advanced Normalitazion Tools for neuroimaging" +HOMEPAGE="http://stnava.github.io/ANTs/"; +SRC_URI=" + https://github.com/ANTsX/ANTs/archive/v${PV}.tar.gz -> ${P}.tar.gz + test? ( + http://resources.chymera.eu/distfiles/ants_testdata-${PV}.tar.xz + ) +" + +SLOT="0" +LICENSE="BSD" +KEYWORDS="~amd64 ~x86" +IUSE="test vtk" +RESTRICT="!test? ( test )" + +DEPEND=" + vtk? ( + ~sci-libs/itk-5.1.0[vtkglue] + sci-libs/vtk + ) + !vtk? ( ~sci-libs/itk-5.1.0 ) +" +RDEPEND="${DEPEND}" + +PATCHES=( + "${FILESDIR}/${P}-version.patch" + "${FILESDIR}/${P}-libdir.patch" +) + +S="${WORKDIR}/${MY_PN}-${PV}" + +src_unpack() { + default + if use test; then + mkdir -p "${S}/.ExternalData/MD5" || die "Could not create test data directory." + tar xvf "${DISTDIR}/ants_testdata-${PV}.tar.xz" -C "${S}/.ExternalData/MD5/" > /dev/null || die "Could not unpack test data." + fi +} + +src_configure() { + local mycmakeargs=( + -DUSE_SYSTEM_ITK=ON + -DITK_DIR="${EPREFIX}/usr/include/ITK-5.1/" + -DBUILD_TESTING="$(usex test ON OFF)" + -DUSE_VTK=$(usex vtk ON OFF) + -DUSE_SYSTEM_VTK=$(usex vtk ON OFF) + -DANTS_SNAPSHOT_VERSION:STRING=${PV} + ) + use vtk && mycmakeargs+=( + -DVTK_DIR="${EPREFIX}/usr/include/vtk-8.1/" + ) + use test && mycmakeargs+=( + -DExternalData_OBJECT_STORES="${S}/.ExternalData/MD5" + ) + cmake_src_configure +} + +src_install() { + BUILD_DIR="${WORKDIR}/${P}_build/ANTS-build" + cmake_src_install + cd "${S}/Scripts" || die "scripts dir not found" + dobin *.sh + dodir /usr/$(get_libdir)/ants + insinto "/usr/$(get_libdir)/ants" + doins * + doenvd "${FILESDIR}"/99ants +}
